LOCUS BC063815 3077 bp mRNA linear HUM 24-JAN-2005 DEFINITION Homo sapiens Notch homolog 4 (Drosophila), mRNA (cDNA clone IMAGE:6180034), complete cds. ACCESSION BC063815 VERSION BC063815.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3077) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3077) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: b Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27894369 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..3077 /db_xref="H-InvDB:HIT000261193_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6180034" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3077 /gene="NOTCH4" /gene_synonym="INT3" /gene_synonym="NOTCH3" /db_xref="GeneID:4855" /db_xref="MIM:164951" CDS 130..2073 /gene="NOTCH4" /gene_synonym="INT3" /gene_synonym="NOTCH3" /codon_start=1 /product="NOTCH4 protein" /protein_id="AAH63815.1" /db_xref="GeneID:4855" /db_xref="MIM:164951" /translation="MQPPSLLLLLLLLLLLCVSVVRPRGLLCGSFPEPCANGGTCLSL SLGQGTCQCAPGFLGETCQFPDPCQNAQLCQNGGSCQALLPAPLGLPSSPSPLTPSFL CTCLPGFTGERCQAKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWTGEQCQLRDFC SANPCVNGGVCLATYPQIQCHCPPGFEGHACERDVNECFQDPGPCPKGTSCHNTLGSF QCLCPVGQEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPGFIGPDCEVN PDNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECETQGPPHCRNGGTCQN SAGSFHCVCVSGWGGTSCEENLDDCIAATCAPGSTCIDRVGSFSCLCPPGRTGLLCHL EDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDECLMAQQGPSPCEHGG SCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLATFHCLCPPGLEGQ LCEVETNECASAPCLNHADCHDLLNGFQCICLPGFSGTRCEEDIDECRSSPCANGGQC QDQPGAFHCKCLPGFEGPRCQTEVDECLSDPCPVGASCLDLPGAFFCLCPSGFTGSQG RHWKELAEYFIPFGLGQSSLVGV" BASE COUNT 683 a 874 c 889 g 631 t ORIGIN 1 cttgcagcag gccgaggagg aagaagaggg gcagtgggag cagaggaggt ggctcctgcc 61 ccagtgagag ctctgagggt ccctgcctga agagggacag ggaccggggc ttggagaagg 121 ggctgtggaa tgcagccccc ttcactgctg ctgctgctgc tgctgctgct gctgctatgt 181 gtctcagtgg tcagacccag agggctgctg tgtgggagtt tcccagaacc ctgtgccaat 241 ggaggcacct gcctgagcct gtctctggga caagggacct gccagtgtgc ccctggcttc 301 ctgggtgaga cgtgccagtt tcctgacccc tgccagaacg cccagctctg ccaaaatgga 361 ggcagctgcc aagccctgct tcccgctccc ctagggctcc ccagctctcc ctctccattg 421 acacccagct tcttgtgcac ttgcctccct ggcttcactg gtgagagatg ccaggccaag 481 cttgaagacc cttgtcctcc ctccttctgt tccaaaaggg gccgctgcca catccaggcc 541 tcgggccgcc cacagtgctc ctgcatgcct ggatggacag gtgagcagtg ccagcttcgg 601 gacttctgtt cagccaaccc atgtgttaat ggaggggtgt gtctggccac atacccccag 661 atccagtgcc actgcccacc gggcttcgag ggccatgcct gtgaacgtga tgtcaacgag 721 tgcttccagg acccaggacc ctgccccaaa ggcacctcct gccataacac cctgggctcc 781 ttccagtgcc tctgccctgt ggggcaggag ggtccacgtt gtgagctgcg ggcaggaccc 841 tgccctccta ggggctgttc gaatgggggc acctgccagc tgatgccaga gaaagactcc 901 acctttcacc tctgcctctg tcccccaggt ttcataggcc cagactgtga ggtgaatcca 961 gacaactgtg tcagccacca gtgtcagaat gggggcactt gccaggatgg gctggacacc 1021 tacacctgcc tctgcccaga aacctggaca ggctgggact gctccgaaga tgtggatgag 1081 tgtgagaccc agggtccccc tcactgcaga aacgggggca cctgccagaa ctctgctggt 1141 agctttcact gcgtgtgtgt gagtggctgg ggcggcacaa gctgtgagga gaacctggat 1201 gactgtattg ctgccacctg tgccccggga tccacctgca ttgaccgggt gggctctttc 1261 tcctgcctct gcccacctgg acgcacagga ctcctgtgcc acttggaaga catgtgtctg 1321 agccagccgt gccatgggga tgcccaatgc agcaccaacc ccctcacagg ctccacactc 1381 tgcctgtgtc agcctggcta ttcggggccc acctgccacc aggacctgga cgagtgtctg 1441 atggcccagc aaggcccaag tccctgtgaa catggcggtt cctgcctcaa cactcctggc 1501 tccttcaact gcctctgtcc acctggctac acaggctccc gttgtgaggc tgatcacaat 1561 gagtgcctct cccagccctg ccacccagga agcacctgtc tggacctact tgccaccttc 1621 cactgcctct gcccgccagg cttagaaggg cagctctgtg aggtggagac caacgagtgt 1681 gcctcagctc cctgcctgaa ccacgcggat tgccatgacc tgctcaacgg cttccagtgc 1741 atctgcctgc ctggattctc cggcacccga tgtgaggagg atatcgatga gtgcagaagc 1801 tctccctgtg ccaatggtgg gcagtgccag gaccagcctg gagccttcca ctgcaagtgt 1861 ctcccaggct ttgaagggcc acgctgtcaa acagaggtgg atgagtgcct gagtgaccca 1921 tgtcccgttg gagccagctg ccttgatctt ccaggagcct tcttttgcct ctgcccctct 1981 ggtttcacag gttcacaggg gaggcactgg aaagaactgg cagaatattt tattccattt 2041 gggttggggc agagttcatt ggtgggtgtt tgatggttgg gatgtgagaa tagaatgaga 2101 atggtatcct ttaaagttat ttagtgtaaa acctgcacaa ttgtacaacc atggggacaa 2161 gggcaggggt taccgtaggg cccacatggg cccagtgtaa atggtgtgat tgcggcttgg 2221 gagcagagga cggggctcaa agaaaaggca ttcacttgct tatttagcaa gcacttacca 2281 actgcctact atgccagata cggaggcaaa tctgagtaag acagttgcca tcttcatgtg 2341 actttaagtc taatacagag agaccaacaa gtctcctgtt gatcatagcc cacagaggtg 2401 ctctgagaga aaaacgtgca ggatattaca agagcacaga ggaccagcca acccagacta 2461 aaaatggagg aggtgatggc tgagatgagt cttgaaagat aagcagaggc tgggcgtggt 2521 ggctcacgcc tatagtccca gcacttcggg aagccgaggc gggtggatca cccgagatta 2581 ggagttcgag atcagcctgg ccaacatggt gaaacctcgt ctctattaaa aatacaaatt 2641 acactttggg aggccgaggc gggtggatca tgaggtcagg agatcgacac tatcctggct 2701 aacacggtga aaccccatct caactaaaaa tacaaaaaaa taactgggcg tggtggcggg 2761 cgcctatagt cccagctact ccagaggctg aggcaggaga atggcgtgaa cccgggaggc 2821 ggagcttgca gtgagctgag atcacgccac tgcactccag cctgggtggc agagtaagac 2881 tccacctcaa aaaaaaaaaa aaatacaaaa attagccagg cgtggtggcg ggcgcctgca 2941 atcccagcta ttggggaggc tgaggcaaga gaatcgcttg aacctgggaa gcagtggttg 3001 cagtgagctg agatcactcc actgcactcc agcctgggtg acagagcaag attccatctc 3061 aaaaaaaaaa aaaaaaa //