LOCUS BC063798 3818 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SCY1-like 2 (S. cerevisiae), mRNA (cDNA clone
MGC:70725 IMAGE:6473586), complete cds.
ACCESSION BC063798
VERSION BC063798.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3818)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3818)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51870926.
FEATURES Location/Qualifiers
source 1..3818
/db_xref="H-InvDB:HIT000261184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70725 IMAGE:6473586"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3818
/gene="SCYL2"
/gene_synonym="CVAK104"
/gene_synonym="FLJ10074"
/gene_synonym="KIAA1360"
/db_xref="GeneID:55681"
/db_xref="HGNC:HGNC:19286"
CDS 51..2840
/gene="SCYL2"
/gene_synonym="CVAK104"
/gene_synonym="FLJ10074"
/gene_synonym="KIAA1360"
/codon_start=1
/product="SCY1-like 2 (S. cerevisiae)"
/protein_id="AAH63798.1"
/db_xref="GeneID:55681"
/db_xref="HGNC:HGNC:19286"
/translation="MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNG
LAWKIFNGTKKSTKQEVAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLL
TVQHPLEESRDCLAFCTEPVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQ
VSEGLSFLHSSVKMVHGNITPENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEW
DPNLPSLCLPNPEYLAPEYILSVSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYK
SFSRQLDQLSRLGSSSLTNIPEEVREHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVT
LQYFDTLFQRDNLQKSQFFKGLPKVLPKLPKRVIVQRILPCLTSEFVNPDMVPFVLPN
VLLIAEECTKEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVL
PMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNS
LVCLGKILEYLDKWFVLDDILPFLQQIPSKEPAVLMGILGIYKCTFTHKKLGITKEQL
AGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLD
IGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEE
KQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKS
SASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSP
STVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQL
SQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTM
TNSSSASNDLKDLFG"
BASE COUNT 1220 a 714 c 699 g 1185 t
ORIGIN
1 ttggacacta ctctaggacc gggtaactat aactacccaa tattgcagcc atggagtcca
61 tgcttaataa attgaagagt actgttacaa aagtaacagc tgatgtcact agtgctgtaa
121 tgggaaatcc tgtcactaga gaatttgatg ttggtcgaca cattgccagt ggtggcaatg
181 ggctagcttg gaagattttt aatggcacaa aaaagtcaac aaagcaggaa gtggcagttt
241 ttgtctttga taaaaaactg attgacaagt atcaaaaatt tgaaaaggat caaatcattg
301 attctctaaa acgaggagtc caacagttaa ctcggcttcg acaccctcga cttcttactg
361 tccagcatcc tttagaagaa tccagggatt gcttggcatt ttgtacagaa ccagtttttg
421 ccagtttagc caatgttctt ggtaactggg aaaatctacc ttcccctata tctccagaca
481 ttaaggatta taaactttat gatgtagaaa ccaaatatgg tttgcttcag gtttctgaag
541 gattgtcatt cttgcatagc agtgtgaaaa tggtgcatgg aaatatcact cctgaaaata
601 taattttgaa taaaagtgga gcctggaaaa taatgggttt tgatttttgt gtatcatcaa
661 ccaatccttc tgaacaagag cctaaatttc cttgtaaaga atgggaccca aatttacctt
721 cattgtgtct tccaaatcct gaatatttgg ctcctgaata catactttct gtgagctgtg
781 aaacagccag tgatatgtat tctttaggaa ctgttatgta tgctgtattt aataaaggga
841 aacctatatt tgaagtcaac aagcaagata tttacaagag tttcagtagg cagttggatc
901 agttgagtcg tttaggatct agttcactta caaatatacc tgaggaagtt cgtgaacatg
961 taaagctact gttaaatgta actccgactg taagaccaga tgcagatcaa atgacaaaga
1021 ttcccttctt tgatgatgtt ggtgcagtaa cactgcaata ttttgatacc ttattccaaa
1081 gagataatct tcagaaatca cagtttttca aaggactgcc aaaggttcta ccaaaactgc
1141 ccaagcgtgt cattgtgcag agaattttgc cttgtttgac ttcagaattt gtaaaccctg
1201 acatggtacc ttttgttttg cccaatgttc tacttattgc tgaggaatgc accaaagaag
1261 aatatgtcaa attaattctt cctgaacttg gccctgtgtt taagcagcag gagccaatcc
1321 agattttgtt aattttccta caaaaaatgg atttgctact aaccaaaacc cctcctgatg
1381 agataaagaa cagtgttcta cccatggttt acagagcact agaagctcct tccattcaga
1441 tccaggagct ctgtctaaac atcattccaa cctttgcaaa tcttatagac tacccatcca
1501 tgaaaaacgc tttgatacca agaattaaaa atgcttgtct acaaacatct tcccttgcgg
1561 ttcgtgtaaa ttcattagtg tgcttaggaa agattttgga atacttggat aagtggtttg
1621 tacttgatga tatcctaccc ttcttacaac aaattccatc caaggaacct gcggtcctca
1681 tgggaatttt aggtatttac aaatgtactt ttactcataa gaagttggga atcaccaaag
1741 agcagctggc cggaaaagtg ttgcctcatc ttattcccct gagtattgaa aacaatctta
1801 atcttaatca gttcaattct ttcatttccg tcataaaaga aatgcttaat agattggagt
1861 ctgaacataa gactaaactg gagcaacttc atataatgca agaacagcag aaatctttgg
1921 atataggaaa tcaaatgaat gtttctgagg agatgaaagt tacaaatatt gggaatcagc
1981 aaattgacaa agtttttaac aacattggag cagaccttct gactggcagt gagtccgaaa
2041 ataaagagga cgggttacag aataaacata aaagagcatc acttacactt gaagaaaaac
2101 aaaaattagc aaaagaacaa gagcaggcac agaagctgaa aagccagcag cctcttaaac
2161 cccaagtgca cacacctgtt gctactgtta aacagactaa ggacttgaca gacacactga
2221 tggataatat gtcatccttg accagccttt ctgttagtac ccctaaatct tctgcttcaa
2281 gtactttcac ttctgttcct tccatgggca ttggtatgat gttttctaca ccaactgata
2341 atacaaagag aaatttgaca aatggcctaa atgccaatat gggctttcag acttcaggat
2401 tcaacatgcc cgttaataca aaccagaact tctacagtag tccaagcaca gttggagtga
2461 ccaagatgac tctgggaaca cctcccactt tgccaaactt caatgctttg agtgttcctc
2521 ctgctggtgc aaagcagacc caacaaagac ccacagatat gtctgccctt aataatctct
2581 ttggccctca gaaacccaaa gttagcatga accagttatc acaacagaaa ccaaatcagt
2641 ggcttaatca gtttgtacct cctcaaggtt ctccaactat gggcagttca gtaatgggga
2701 cacagatgaa cgtgatagga caatctgctt ttggtatgca gggtaatcct ttctttaacc
2761 cacagaactt tgcacagcca ccaactacta tgaccaatag cagttcagct agcaatgatt
2821 taaaagatct ttttgggtga ggtgtcttac ttctattttg aaggattatt tcagtttcaa
2881 tcatgggtga gctgatttac atctttatat agttggcttg gaggaagtac ttctatggga
2941 aagtgaacag ttctgtgaca ggaaacatct ctgtccatgc cagcatagta gttgtatgga
3001 cttctaacca gttgagtttt ttaaagcatt gaggattttt tcctcttacc aactcctctt
3061 caggttttta aagacccagc ccttcccaat ctcaaagaga aaaaggaaac tgagttatct
3121 tgaataacat aactttttaa tcaaatgttt attttggctt gtggatcttg gtgttattta
3181 aaaaattgag gtgatggtca ttgcaagctc atctattaag tactatatgg tacacagtct
3241 atgagtcatt agtcttcatt ttaatatgta aaaaatcttg atgctgtatt gatttgtttg
3301 catttaagat gacagtgaga aaatgataag cataaagaga agtatcaggt tatttgcttt
3361 ttccaaactt ttcagatgaa ctattgttta gtacagagac tgagcaaata ctacaaaatt
3421 caacttaacc ttcatttcat tggtttaaat gcgttattaa ccatcttaag tgcaaactaa
3481 tcattgtaaa ttatatttta gcatggtctg cctcaaatag taatgtattt ttctgcattc
3541 acttggatat atttagaatc acttttttcc tcctgtatca aggaagaggt atgtgctgat
3601 ttgtttggat atttgacaag gcactctgat gtgacttccc tgactactac cttcatattt
3661 catttcaaat tcaaacttct gaggttgcag catatatgaa ttgcattttc aaaagaagat
3721 ttgtaagaat taaactatat ttatgagtaa acttttgagg tttctgctgt attgtttcaa
3781 atgtaataaa ctttacttct gtaaaaaaaa aaaaaaaa
//