LOCUS BC063688 1495 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 54, member A, mRNA
(cDNA clone MGC:74709 IMAGE:4455541), complete cds.
ACCESSION BC063688
VERSION BC063688.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39653314.
FEATURES Location/Qualifiers
source 1..1495
/db_xref="H-InvDB:HIT000261141"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74709 IMAGE:4455541"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1495
/gene="FAM54A"
/db_xref="GeneID:113115"
/db_xref="HGNC:HGNC:21115"
CDS 80..1237
/gene="FAM54A"
/codon_start=1
/product="family with sequence similarity 54, member A"
/protein_id="AAH63688.2"
/db_xref="GeneID:113115"
/db_xref="HGNC:HGNC:21115"
/translation="MSLILNILREMLEYFGVPVEQVLLIWENKDYGSTRSIVRIIGKM
LPLEPCRRPNFELIPLLNSVDSDNCGSMVPSFADILYVANDEEASYLRFRNSIWKNEE
EKVEIFHPLRLVRDPLSPAVRQKETVKNDLPVNEAAIRKIAALENELTFLRSQIAAIV
EMQELKNSTNSSSFGLSDERISLGQLSSSRAAHLSVDPDQLPGSVLSPPPPPPLPPQF
SSLQPPCFPPVQPGSNNICDSDNPATEMSKQNPAANKTNYSHHSKSQRNKDIPNMLDV
LKDMNKVKLRAIERSPGGRPIHKRKRQNSHWDPVSLISHALKQKFAFQEDDSFEKENR
SWESSPFSSPETSRFGHHISQSEGQRTKEEMVNTKAVDQGISNTSLLNSRI"
BASE COUNT 464 a 290 c 287 g 454 t
ORIGIN
1 gcagtccggt cctagggact agcaggcacc aagaaactga taatgttcct ttgaattggc
61 ttctgtattt gcttcatcaa tgtctctcat actgaatatc ttaagagaga tgctggaata
121 ttttggcgtt cctgtagaac aggttttgct gatttgggaa aataaagact atggatcaac
181 taggagtatt gttcgtatta ttgggaaaat gcttccactg gaaccttgtc gaagacctaa
241 ttttgagttg atcccgctct tgaactctgt agactctgat aattgtggat ctatggttcc
301 atcttttgct gatattttgt atgtggcaaa tgatgaagaa gccagttatc tcagatttcg
361 aaatagtata tggaaaaatg aagaagagaa agtggaaatt tttcatcctt tgcgactagt
421 tcgggatcca ctgtcacctg ctgtaagaca gaaagaaact gtgaaaaatg acctgcctgt
481 aaatgaagct gcaattagaa aaatagctgc ccttgaaaat gagctgactt ttcttcgctc
541 tcagattgca gcaattgtgg aaatgcagga actgaaaaat agtacaaatt ctagttcctt
601 tggcttgagt gacgagcgca ttagtttggg tcagctgtca tcatcgcggg ctgcccatct
661 gagtgtggac ccagatcagc ttccaggttc agtgctttct cctcctcctc ctccaccact
721 tcctcctcag ttttcatctc tccagccacc gtgttttcct cccgtacaac caggatctaa
781 taatatttgt gactcagata atccagcaac tgaaatgagc aaacagaacc cggctgctaa
841 taagaccaat tatagtcatc attcaaaaag ccagagaaat aaagatattc caaacatgtt
901 ggacgttcta aaggatatga ataaggttaa gcttcgtgca attgagcggt cacctggcgg
961 tagacccatt cataagagga aaagacagaa ttcacattgg gatccagttt ctttaatatc
1021 tcatgcactt aaacagaaat ttgcatttca agaagatgat tcttttgaga aagagaatag
1081 atcttgggaa tcttccccat tttctagtcc agaaacttca aggtttggac atcacatttc
1141 acagtcagaa ggacagcgaa ctaaagaaga aatggtcaac acaaaagctg ttgaccaagg
1201 tatcagcaac acaagccttc taaactcaag gatttaaact caacttaagg ttgagcttta
1261 aacttccaaa acttcttcct ggatgataaa ttattcttag aaactgattt ggactgttaa
1321 aggctaaaag tagatgtatt taaagactct tcttgacaca ttttgcctac acttgctatg
1381 taaatatgta tgcctgtcat ttttgtttcc tttgttcctt tttacgttta tactctgttc
1441 ttctgtacat agagcttaaa ataaacattc tttttgaaaa aaaaaaaaaa aaaaa
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