LOCUS BC063629 917 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens HSPB (heat shock 27kDa) associated protein 1, mRNA
(cDNA clone IMAGE:3892258), complete cds.
ACCESSION BC063629
VERSION BC063629.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 917)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 917)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: d Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147627
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..917
/db_xref="H-InvDB:HIT000261083"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3892258"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..917
/gene="HSPBAP1"
/gene_synonym="FLJ22623"
/gene_synonym="PASS1"
/db_xref="GeneID:79663"
/db_xref="HGNC:HGNC:16389"
/db_xref="MIM:608263"
CDS 80..757
/gene="HSPBAP1"
/gene_synonym="FLJ22623"
/gene_synonym="PASS1"
/codon_start=1
/product="HSPBAP1 protein"
/protein_id="AAH63629.1"
/db_xref="GeneID:79663"
/db_xref="HGNC:HGNC:16389"
/db_xref="MIM:608263"
/translation="MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPA
IFCNMVFDWPARHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFL
TWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE
STLWIGSLGAHTPCHLDSYGCNLVFQVQGRLECNGMIIAPGPQAILLPQPLKYLGLQE
TMASLSS"
BASE COUNT 297 a 200 c 197 g 223 t
ORIGIN
1 tcggagtttg gcccctactc tgaccccacc ccagctccgc tccgccttgg gttccggcag
61 aacccgcctt gcggtagcca tggcagcagg ctccgaggcg accactcctg tgatcgttgc
121 ggctggggct ggaggggagg aaggtgaaca tgtcaaacct tttaagccag agaaagcaaa
181 agaaattatc atgtctttac aacaacctgc aatcttctgt aacatggtgt ttgattggcc
241 agcacgacac tggaatgcta aatacctttc gcaggtcctt catggcaagc agatacgatt
301 cagaatgggg atgaaaagca tgagcacagt tcctcagttt gaaactacat gtaattacgt
361 agaagctaca ctcgaagagt ttctgacctg gaactgtgac cagtctagta tttctggacc
421 atttagagat tatgaccatt ccaagttctg ggcttatgct gactataaat attttgtcag
481 tctatttgaa gacaagacag atcttttcca ggatgtgaaa tggtctgact tcgggtttcc
541 tggaagaaat ggacaggaaa gtacattgtg gattggctcc ttgggagccc acacaccctg
601 tcatctggac tcctatggtt gtaacttggt attccaggta caaggaaggc tggagtgcaa
661 tggcatgatc atagctcctg gacctcaagc catcctcctg ccgcagcctc tcaagtatct
721 aggactacag gaaacgatgg catctctttc ctcctgaaga tactcctttc ctttatccaa
781 ctagaatccc ttatgaagaa tctagtgtgt tcagtaaaat caatgttgtc aatcctgaaa
841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaag
//