LOCUS BC063607 2510 bp mRNA linear HUM 30-MAR-2004 DEFINITION Homo sapiens ATPase family, AAA domain containing 3A, mRNA (cDNA clone MGC:74860 IMAGE:4939339), complete cds. ACCESSION BC063607 VERSION BC063607.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2510) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2510) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 134 Row: o Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13994293. FEATURES Location/Qualifiers source 1..2510 /db_xref="H-InvDB:HIT000261062_01" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74860 IMAGE:4939339" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2510 /gene="ATAD3A" /gene_synonym="FLJ10709" /db_xref="GeneID:55210" CDS 85..1845 /gene="ATAD3A" /gene_synonym="FLJ10709" /codon_start=1 /product="ATAD3A protein" /protein_id="AAH63607.1" /db_xref="GeneID:55210" /translation="MSWLFGINKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPK DKWSNFDPTGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQ LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQE ESVQKQEAMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEH RQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIE ARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIA TRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAM HKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLV LASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQ FDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQ QKMCWLKAEGPGRGDEPSPS" misc_feature 1123..1707 /gene="ATAD3A" /gene_synonym="FLJ10709" /note="AAA; Region: ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes" /db_xref="CDD:pfam00004" BASE COUNT 533 a 742 c 859 g 376 t ORIGIN 1 ggcgcgtgga ggctgctccc agccgcgcgc gagtcagact cgggtggggg tcccggcggc 61 ggtagcggcg gcggcggtgc gagcatgtcg tggctcttcg gcattaacaa gggccccaag 121 ggtgaaggcg cggggccgcc gccgcctttg ccgcccgcgc agcccggggc cgagggcggc 181 ggggaccgcg ggttgggaga ccggccggcg cccaaggaca aatggagcaa cttcgacccc 241 accggcctgg agcgcgccgc caaggcggcg cgcgagctgg agcactcgcg ttatgccaag 301 gacgccctga atctggcaca gatgcaggag cagacgctgc agttggagca acagtccaag 361 ctcaaagagt atgaggccgc cgtggagcag ctcaagagcg agcagatccg ggcgcaggct 421 gaggagagga ggaagaccct gagcgaggag acccggcagc accaggccag ggcccagtat 481 caagacaagc tggcccggca gcgctacgag gaccaactga agcagcagca acttctcaat 541 gaggagaatt tacggaagca ggaggagtcc gtgcagaagc aggaagccat gcggcgagcc 601 accgtggagc gggagatgga gctgcggcac aagaatgaga tgctgcgagt ggaggccgag 661 gcccgggcgc gcgccaaggc cgagcgggag aatgcagaca tcatccgcga gcagatccgc 721 ctgaaggcgg ccgagcaccg tcagaccgtc ttggagtcca tcaggacggc tggcaccttg 781 tttggggaag gattccgtgc ctttgtgaca gactgggaca aagtgacagc cacggtggct 841 gggctgacgc tgctggctgt tggggtctac tcagccaaga atgccacgct tgtcgccggc 901 cgcttcatcg aggctcggct ggggaagccg tccctagtga gggagacgtc ccgcatcacg 961 gtgcttgagg cgctgcggca ccccatccag gtcagccggc ggctcctcag tcgaccccag 1021 gacgcgctgg agggtgttgt gctcagtccc agcctggaag cacgggtgcg cgacatcgcc 1081 atagcaacaa ggaacaccaa gaagaaccgc agcctgtaca ggaacatcct gatgtacggg 1141 ccaccaggca ccgggaagac gctgtttgcc aagaaactcg ccctgcactc aggcatggac 1201 tacgccatca tgacaggcgg ggacgtggcc cccatggggc gggaaggcgt gaccgccatg 1261 cacaagctct ttgactgggc caataccagc cggcgcggcc tcctgctctt tgtggatgaa 1321 gcggacgcct tccttcggaa gcgagccacc gagaagataa gcgaggacct cagggccaca 1381 ctgaacgcct tcctgtaccg cacgggccag cacagcaaca agttcatgct ggtcctggcc 1441 agcaaccaac cagagcagtt cgactgggcc atcaatgacc gcatcaatga gatggtccac 1501 ttcgacctgc cagggcagga ggaacgggag cgcctggtga gaatgtattt tgacaagtat 1561 gttcttaagc cggccacaga aggaaagcag cgcctgaagc tggcccagtt tgactacggg 1621 aggaagtgct cggaggtcgc tcggctgacg gagggcatgt cgggccggga gatcgctcag 1681 ctggccgtgt cctggcaggc cacggcgtat gcctccgagg acggggtcct gaccgaggcc 1741 atgatggaca cccgcgtgca agatgctgtc cagcagcacc agcagaagat gtgctggctg 1801 aaggcggaag ggcctgggcg tggggacgag ccctccccat cctgagtcca cagggagatc 1861 cacagctcac ggagcctggc cgcggacccc tcccacccct gccttgccgg cccctgcaca 1921 tttaggatat gctcctggat ggggactggg ctgtgcccag ggcctctgtc ccccaggatg 1981 tcttgtggtg gcggtcggtc gttctgcccc ccagggcacc ccctgttgta ggcactggct 2041 agggaggggc aggcctcctt cctgcccctc gagacactct tgggagatgc attttccgtc 2101 tggctcacag ggggagggtg aggctttgca ccccagcccc tgcccaggcc actgtgaggg 2161 tgggtgctgg ctgagccccc ggggcagcag gagccaggca ggtgatgtct ttgttctcgg 2221 ctcccacagc agagccaggt gagggggcgc ctgccagggc cagacccagg tggggcagcc 2281 tgaaccctgc ttccccctgt ggccggcatg ccccgatctt tcacacactg gtgaccctga 2341 gagaggaggg aggagggaac ctggcggggg tgtctgaggc cgcactgtca gctggccggt 2401 ccaagcctgt ggctggagct ggggtctgtt tacctaataa agtcccacag gtgcctcatt 2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //