LOCUS BC063583 5297 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NIPA-like domain containing 3, mRNA (cDNA clone
MGC:74951 IMAGE:4386115), complete cds.
ACCESSION BC063583
VERSION BC063583.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5297)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5297)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254941.
FEATURES Location/Qualifiers
source 1..5297
/db_xref="H-InvDB:HIT000261038"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74951 IMAGE:4386115"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5297
/gene="NPAL3"
/gene_synonym="DJ462O23.2"
/gene_synonym="RP3-462O23.3"
/db_xref="GeneID:57185"
/db_xref="HGNC:HGNC:25233"
CDS 338..1558
/gene="NPAL3"
/gene_synonym="DJ462O23.2"
/gene_synonym="RP3-462O23.3"
/codon_start=1
/product="NIPA-like domain containing 3"
/protein_id="AAH63583.1"
/db_xref="GeneID:57185"
/db_xref="HGNC:HGNC:25233"
/translation="MDGSHSAALKLQQLPPTSSSSAVSEASFSYKENLIGALLAIFGH
LVVSIALNLQKYCHIRLAGSKDPRAYFKTKTWWLGLFLMLLGELGVFASYAFAPLSLI
VPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAVVGTYLLVTFAPNSHE
KMTGENVTRHLVSWPFLLYMLVEIILFCLLLYFYKEKNANNIVVILLLVALLGSMTVV
TVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVG
YILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKPIPFEPYI
SMDAMPGMQNMHDKGMTVQPELKASFSYGALENNDNISEIYAPATLPVMQEEHGSRSA
SGVPYRVLEHTKKE"
BASE COUNT 1350 a 1240 c 1337 g 1370 t
ORIGIN
1 gtctgcctcc gggttgcacg aagagtccga gtcatttctc agaaggtttt gataggtggg
61 ccttagagga gacgccgccg agcaccgcaa gaactggaaa acacacccct ctctgtctgc
121 ctgggagagc cacggaaatt ggcacttctc tgagtgaagc tgaggagaag gctgtaaatc
181 tgccaaaaca gccttgaagt attcttttgt catgaggaag tgacggctgc tggagggagg
241 tgaacaccac aaggagagat ggcatctggc ctgggccccg cctagcagca gctccacctc
301 ctaggccagg ccctgtggga tgcgccacta gaccaccatg gacggatccc acagcgcagc
361 cctgaagctg cagcagctgc ctcccacaag tagctccagc gccgtaagcg aggcctcctt
421 ctcctacaag gaaaacctga ttggcgccct cttggcgatc ttcgggcacc tcgtggtcag
481 cattgcactt aacctccaga agtactgcca catccgcctg gcaggctcca aggatccccg
541 ggcctatttc aagaccaaga catggtggct gggcctgttc ctgatgcttc tgggcgagct
601 gggtgtgttc gcctcctacg ccttcgcgcc gctgtcactc atcgtgcccc tcagcgcagt
661 ttctgtgata gctagtgcca tcataggaat catattcatc aaggaaaagt ggaaaccgaa
721 agactttctg aggcgctacg tcttgtcctt tgttggctgc ggtttggctg tcgtgggtac
781 ctacctgctg gtgacattcg cacccaacag tcacgagaag atgacaggcg agaatgtcac
841 caggcacctc gtgagctggc ctttcctttt gtacatgctg gtggagatca ttctgttctg
901 cttgctgctc tacttctaca aggagaagaa cgccaacaac attgtcgtga ttcttctctt
961 ggtggcgtta cttggctcca tgacagtggt gacagtcaag gccgtggctg ggatgcttgt
1021 cttgtccatt caagggaacc tgcagcttga ctaccccatc ttctacgtga tgttcgtgtg
1081 catggtggca accgccgtct atcaggctgc gtttttgagt caagcctcac agatgtacga
1141 ctcctctttg attgccagtg tgggctacat tctgtccaca accattgcta tcacagcagg
1201 tgcaatattt tacctggact tcatcgggga ggacgtgctg cacatctgca tgtttgcact
1261 ggggtgcctc attgcattct tgggcgtctt cttaatcacg cgtaacagga agaagcccat
1321 tccatttgag ccctatattt ccatggatgc catgccaggt atgcagaaca tgcacgataa
1381 agggatgact gtccagcctg aacttaaagc ttctttttcc tatggggctc tggaaaacaa
1441 tgacaacatt tctgagatct acgctcctgc caccctgcca gtcatgcaag aagagcacgg
1501 ctccagaagt gcctctgggg tcccctaccg agtcctagag cacaccaaga aggaatgaga
1561 ctcgcctccc tctatttata actgtcccct ccaggctgac agtggttcaa ccctgaatcc
1621 taaaacttgc ctttcaagtc tcattttgtt tctaactgag aactctatgg atgatgatct
1681 caaaaagcct ttgtctctgg gaaaggatgc gttatcttgg tcttggaaat ttcaaatgat
1741 gagggttggg ggatggaagc attattccag gtggacggga tagaatccag cctctgcctg
1801 gattagccca gggggatttg gaaagccttt ctaccatcct tgaggatggt aactgagctt
1861 cctctgacag tgaccaaagg atgctgtatc cttcagagct aaggcaagac agagagtctg
1921 ctgttaattc tcaaatccag cgaaaggcta gacatctcta aatctcgtct tcctccacct
1981 catgtgcatg cctgatctca ccctgacact cctgatgccg catctgtgat agcactcgtg
2041 ttgccttcac atggcaggct gggccaaccc tgggtggaag gttctgacat ttgtgttttc
2101 agaaatgtac atctgccttc cagtcatctg tgcccttcta gggaagatgt gcttgatatg
2161 ttcaaattgg atctactctg aaaacgaaac ttggttttgg tcctgtgagg actacttgtt
2221 tgtccacctc ctccaccaaa ggaattagga agttaagaga aggggaagaa tatggaggat
2281 aggagagggt gatgatgctt tagcccatta aggaagaaaa gttcccctta ctcttacaaa
2341 aggtgattgc accacttaaa aaaggatagg tagaaaatct ggccatttta tgtgttattt
2401 ttttcctgca taccagtgcc ccctggaaag atggggatgc tcatttcaga gacagcctct
2461 tcacctgtcc tccgtctctc cattacagag ccacaagcca agcttgagtt actggttaat
2521 ttccttgaag tcaatagaga ctctctgggt cctcatcccc atgcatatat gtctgggaga
2581 agcaagcatt ctccaaaaca gggctgttgc tttcttcctg gccgcatatg tgactgtctt
2641 cccctagact gatggtatac ttttgagagg ggcggataaa ggtttgcaaa ctttaatggg
2701 cataaggatc ccctagaagc atatgtaaaa tgcagattcc tgcaccccaa ctgcagacac
2761 tgttaagtgg gactggagtg gggcccacgg gtctgcattc ttaactggta ccaccagtga
2821 ttctgatgcg atgcttcaat cccgagattt cacatctgga aagcctaaga atttacaaag
2881 atgttctgct aaaaccccca gggccccatg cagtcttgct agaaaatttc ctccctaggg
2941 ttcctttgga aggttaaata ctccccatag gatctgtggc atttctccat ccaatgaata
3001 ctacttagag ctacactcac cacttcccta gacagccttt aataggcatg ataacagtgt
3061 taatagacca gtgtgataga tcacttatct ttatggattg tgcttaatac tgatttagta
3121 tcttgactcc aaaaactgac atctgttgtc tgtgataacc acttctgtat tgcgtcttaa
3181 ccacttctgt attgtgtggt cttaactgcc taaggcggca atgggcagtg ggcccctttc
3241 ccttaggatg ggtatcaatt caacaatatt tataaggcat ttactgtgtg ctaagcattt
3301 ggaagaccca ggctacaaaa taagacatag ttcctgccct ccaggccagc agagggaggc
3361 acaaataccc aggaatctct gatgggtgtg aagtgcggtc gtgggccaca gaaaatgacc
3421 gtcatggaga ccctgctaaa ggtcggaccc tgagcccaaa ggggtattca gaagtggaga
3481 tgattttggc cccactcata gatgggtggc aaatctaaga tttgtataaa gcatataaaa
3541 tagggtgatc acccccgagg cagaggggcc agcatttgca aaggcacaga gctaagagga
3601 gctgggcaaa gaaaggaaac ccagggaagg tggtgggaga tgagtctcaa agctaagtag
3661 tggaagctgg gcacagtggc tcatgcctgc aatcccagca ctttgggagg ccaaggctgg
3721 aggatcactt gagcccagga gttttatatc agcctgggca acatagcaag acctcatctc
3781 tgctaaaaat taaaaataaa taaattagct gggtgtggtg gtgcatgcct gtgatcctag
3841 ctactcagga ggctgaggtg ggaggatcgc tagagcccag agaaccaagg ctacagtgag
3901 ccatgatcat gctactgcac tccagcctgg gtgacaatga gaccatggct caaaaaaaaa
3961 aaaaaaaaaa agataagcag tggaggccga atcatggagg gtcttgaata cctggctaag
4021 gagtttaaag tgtatccaag aggacgtggg agccactgat ggttcatgag gaagagaagg
4081 gcaggaccag cactgattga aaaggagggc ttgttcagtg tggaggaaga atcagaaggg
4141 ggaataagtt accttctccg agcctgcaag aacaaaaaac aaaaagcaga aattaaaatc
4201 aggtttcact gctatttata tatttctcct ttcccaaatg atttttctaa agctgggagt
4261 ggaggcagga gggagaaaca gaaggtgagc agggaggcta tttagatgtg tcaaacccgg
4321 gtgatcatta ataatttggg catatatatg ctcccaaact tactctgccc ccttccttcc
4381 cttttttttt tttttttttt ggtatgggcc ttttaggctt gggccagcca gctttcttga
4441 gatgagtgaa taaaagcgta ttgtaatttc atgtctgctt cagatcatgg ggacagtgcc
4501 acccaggaac tgctgctgag gcctgggaag ctcccttgcc ttcgggtttg gagcagtggc
4561 atcatcccac caacctgagt catgaaaggg ctgagcagaa agttaaatgg tagtttcctg
4621 actggaagcc acacgtaggt cacttgagta gtcaggaagc acagtgggtg tggagccatc
4681 atctgtcttg ggctggttcc tcccaatctt tgtccagtgg tataaatgga ctgtctgctg
4741 atggccatac gcagcactgg ctgttaagat ggggaagggg tacatcagga ttccactcat
4801 agccctggtt cgttattgtt actcatggct ctgacgtccc caagccctct tgaatgttgc
4861 aagcaatgtt aaatatcaca cctcggtctc cttttgagca gcccaggtac ctaaagcaag
4921 gtcaccaaac ttgggtttaa acttcagttg ccatcacagc agggttcagg ttatgcagtt
4981 tttgcagtgt ggagttgaac gctgggtaaa gaagggagag ctgactctcc attgcttttc
5041 tagtggaaac cagccagttt gacggcacgg tgcggataca ggactccatc aggctagtgt
5101 tggggaacca gcccggcagc cttccatgtg aattccaaag ctgtttcaac actggctgat
5161 aggcagacaa aaggttactt gtgtgtttct ctgagaagcg gtgtaaagga agtcacctta
5221 gaatatattc tgtgcggatg cttatatttt gttaacttca cgacttatgg catgtcttat
5281 ttaaaaaaaa aaaaaaa
//