LOCUS BC063424 1577 bp mRNA linear HUM 15-FEB-2005
DEFINITION Homo sapiens C-type lectin domain family 12, member A, mRNA (cDNA
clone MGC:70602 IMAGE:5219159), complete cds.
ACCESSION BC063424
VERSION BC063424.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1577)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1577)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42490739.
FEATURES Location/Qualifiers
source 1..1577
/db_xref="H-InvDB:HIT000260884"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70602 IMAGE:5219159"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1577
/gene="CLEC12A"
/gene_synonym="CLL-1"
/gene_synonym="CLL1"
/gene_synonym="DCAL-2"
/gene_synonym="MICL"
/db_xref="GeneID:160364"
CDS 163..804
/gene="CLEC12A"
/gene_synonym="CLL-1"
/gene_synonym="CLL1"
/gene_synonym="DCAL-2"
/gene_synonym="MICL"
/codon_start=1
/product="CLEC12A protein"
/protein_id="AAH63424.1"
/db_xref="GeneID:160364"
/translation="MSEEVTYADLQFQNSSEMEKIPEIGKFGEKAPPAPSHVWRPAAL
FLTLLCLLLLIGLGVLASMFHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNK
IRNLSTTLQTIATKLCRELYSKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMA
CAAQNASLLKINNKNALEFIKSQSRSYDYWLGLSPEEDSTRGMRVDNIINSSA"
BASE COUNT 557 a 248 c 310 g 462 t
ORIGIN
1 tggtacagta ggtttataaa cagaagttta aacttgtaag cttaagcttc cgtttataaa
61 cagaagttta aaattatagg tcctgtttaa cattcagctc tgttaactca ctcatctttt
121 tgtgttttta cactttgtca agatttcttt acatattcat caatgtctga agaagttact
181 tatgcagatc ttcaattcca gaactccagt gagatggaaa aaatcccaga aattggcaaa
241 tttggggaaa aagcacctcc agctccctct catgtatggc gtccagcagc cttgtttctg
301 actcttctgt gccttctgtt gctcattgga ttgggagtct tggcaagcat gtttcacgta
361 actttgaaga tagaaatgaa aaaaatgaac aaactacaaa acatcagtga agagctccag
421 agaaatattt ctctacaact gatgagtaac atgaatatct ccaacaagat caggaacctc
481 tccaccacac tgcaaacaat agccaccaaa ttatgtcgtg agctatatag caaagaacaa
541 gagcacaaat gtaagccttg tccaaggaga tggatttggc ataaggacag ctgttatttc
601 ctaagtgatg atgtccaaac atggcaggag agtaaaatgg cctgtgctgc tcagaatgcc
661 agcctgttga agataaacaa caaaaatgca ttggaattta taaaatccca gagtagatca
721 tatgactatt ggctgggatt atctcctgaa gaagattcca ctcgtggtat gagagtggat
781 aatataatca actcctctgc ctgaaaatat caaacgaaga aagaaaccag agtctcaacc
841 tgctggacac tattggaagt ccatcattta acacgttttt agtatatact tttagcagga
901 gacagctctg agtcaactgt gttgaggtgc caccacagcg agtttaggca ctcagatccc
961 tgcatactca tcacattggg ccataatggc aaatagaatt ttttgttttg ttttgtttgt
1021 ttgctttttc tttcacatag aaatagtaag tgtaggagtg tgggtcagaa agaaaaggtg
1081 gccctacctc tgatggttgg caatgatagg atacaatggg agataagcta tctacaaatg
1141 gagtggagaa ggatatatat ttcaaaggcc taatttgtag tgaaagacta gagacaaagg
1201 taatgtgtgt gtcaggagag agtacagatg gaatcttgtt ttgcaaacgt agaatatgta
1261 tgtgtttgta attattgcaa atggaatggt aatctataat ggaatggaaa acattgtaga
1321 tattttcagt tatcaaaaag aaaactgaaa aagtatataa taattgtatg tatgatatat
1381 atatgtgtgt gtgtgtgtat atatatcttc actttataac tctgtgttgt tttggggttt
1441 gtttctgaaa gggggttgta ataaatgaca tctgtactat gtcaccacaa ataaatctca
1501 ttcttaaaca tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaag
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