LOCUS       BC063423                2000 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens sorting nexin 20, mRNA (cDNA clone IMAGE:5218959),
            complete cds.
ACCESSION   BC063423
VERSION     BC063423.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2000)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 135 Row: j Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 33504570
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2000
                     /db_xref="H-InvDB:HIT000260883"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5218959"
                     /tissue_type="Blood, adult leukocytes"
                     /clone_lib="NIH_MGC_118"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2000
                     /gene="SNX20"
                     /gene_synonym="SLIC-1"
                     /gene_synonym="SLIC1"
                     /db_xref="GeneID:124460"
                     /db_xref="HGNC:HGNC:30390"
     CDS             115..423
                     /gene="SNX20"
                     /gene_synonym="SLIC-1"
                     /gene_synonym="SLIC1"
                     /codon_start=1
                     /product="SNX20 protein"
                     /protein_id="AAH63423.1"
                     /db_xref="GeneID:124460"
                     /db_xref="HGNC:HGNC:30390"
                     /translation="MASPEHPGSPGCMGPITQCTARTQQEAPATGPDLLHPGPDGHLD
                     THSGLSSNSSMTTRELQQYWQNQKCRWKHVKLLFEIASARIEERKVSKFVAPAPDATP
                     "
BASE COUNT          560 a          558 c          486 g          396 t
ORIGIN      
        1 gtggcagccc ctcggcttgt cgccggagct gagaaccaag agctcgaagg ggccatatga
       61 cactcctccc ggacccctgg acacacacag ccctggagac tggagccttg gagcatggca
      121 agtccagagc accctgggag ccctggctgc atgggaccca taacccagtg cacggcaagg
      181 acccagcagg aagcaccagc cactggcccc gacctcctgc acccaggacc tgacgggcac
      241 ttagacacac acagtggcct gagctccaac tccagcatga ccacgcggga gcttcagcag
      301 tactggcaga accagaaatg ccgctggaag cacgtcaaac tgctctttga gatcgcttca
      361 gctcgcatcg aggagagaaa agtctctaag tttgtggctc cggctcctga cgccacaccc
      421 tgatatcaag accctcagat ggagcgagcg ttctgggctg gtcgaagcct gaagccgcag
      481 tatgtccttg agtgggtccc cccctaccca tctagctgtt gcccccatgg taagatcaag
      541 aaaatgccct cccctccaaa agtccccacg ccgagccctc atctgtcagc tcccaggctc
      601 ggccccctca ctagctccag gctgggaggc acagttcagg gcagactgtg gcccctcagc
      661 atagcatgga cttagctctg ctctctagtg gctgtcccca tagctagaac tctgttttgg
      721 agcagcaaaa ctagttccac ctgctggtag ggctaagttg actcccaaca tgtccccagc
      781 gtgttggtgt tgggaacctt gatctagctg ctcgttttct cagtaaccaa agatccctgg
      841 cactcctacg atgtctcagg ccttatctag agctggggat acagcagtga ccaggacaga
      901 actggtccct gcctcacgga agtgaagtgt cagggggcca ctcccaaagc aaatggaagc
      961 tgggacagaa tgatgtcctc agccaggtgg tcagggaagg cttctcagag ggggcgctgt
     1021 tcaaagaatc acagagcata caaaggagct ggccctggga gcacagagag gggagaattt
     1081 taggcaaaga ggtagcagga gcacagccct gaggcaggaa actacccccc caccaccctc
     1141 ggcatcctca gttctggttt gcacccagaa agggggtagg tccaggacac acccggactg
     1201 atgtgtcaca ctggctgtgc cagctgagag agtgggctcc aggcaccact aacagagaag
     1261 ccttgcaagg caggtccatg caccgcccgc ctccagttac cactcattgc aaaggaaatg
     1321 agctgggagc ctgtgtgtgg gccgtgcaga cccttttggt tacaagccac aaaaacccag
     1381 gttaatctga tgaggaagga atttattatc tgtaaagtcc aggagcaggc tagctttaca
     1441 ccaagcagga tccaaggacc cacactttgt cacctcatat ctctctctct ctcccacttt
     1501 cgctttctct gtctcttctt agttctgctt tcctccactg tgccttcgct ctcagagaga
     1561 gctctcccct ggcagtgaca agatggctgc agcagctcca gcaacctcag aggactcccc
     1621 catccagggt ccttgtgagc tcctcatctg taggatgtgc agtaaacact cacgtgtcct
     1681 ttcctgagga gcccagtggc tagggtgggg gctgaggggc agcccctatg ccctcacagt
     1741 gcagcaacct tggttagctc acccatcagg gcagacttgg gcagaaatca tgtcttggca
     1801 tattgttttg taatctgctt tttaaattgt cactatatat tatgagcatt tccctataat
     1861 atacaatatt cttccataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa aaaaaaaaaa
//