LOCUS BC063411 1963 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B1, mRNA (cDNA clone MGC:74733 IMAGE:5208385), complete
cds.
ACCESSION BC063411
VERSION BC063411.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1963)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1963)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913425.
FEATURES Location/Qualifiers
source 1..1963
/db_xref="H-InvDB:HIT000260871"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74733 IMAGE:5208385"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1963
/gene="ATP6V1B1"
/gene_synonym="RTA1B"
/gene_synonym="VATB"
/gene_synonym="VMA2"
/db_xref="GeneID:525"
/db_xref="HGNC:HGNC:853"
/db_xref="MIM:192132"
CDS 65..1606
/gene="ATP6V1B1"
/gene_synonym="RTA1B"
/gene_synonym="VATB"
/gene_synonym="VMA2"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B1"
/protein_id="AAH63411.1"
/db_xref="GeneID:525"
/db_xref="HGNC:HGNC:853"
/db_xref="MIM:192132"
/translation="MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTV
CSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDAR
KTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYP
EEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHD
DNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTA
EFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGR
VEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSL
SRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQ
KFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLA
PDTAL"
BASE COUNT 462 a 587 c 543 g 371 t
ORIGIN
1 tgaagtctca gagctgccac cagcagcagg ctcagacact gggctcccag ctggggactg
61 ctccatggcc atggagatag acagcaggcc tggggggctc cccggcagta gctgcaacct
121 aggtgcagcc cgagaacaca tgcaggcggt cacccgaaac tacatcaccc acccccgtgt
181 cacctacagg actgtgtgca gtgtgaacgg gcccctggtg gtgctggacc gggtcaagtt
241 tgcccagtat gcggagatcg tccacttcac cctcccagat gggactcaga ggagcgggca
301 ggtgcttgag gtggctggca ccaaggcgat tgttcaggtg tttgaaggga catcagggat
361 cgatgccagg aagaccactt gcgaatttac aggggacatc ctacgaactc cggtgtcaga
421 ggacatgctg ggtcgggttt tcaatggctc cggcaagccc attgacaagg ggccagtggt
481 catggcggag gactttctgg atatcaatgg ccagcccatc aacccgcact cccgcatcta
541 ccccgaggag atgattcaga cgggcatttc tcctattgac gtcatgaaca gcattgcccg
601 cggccagaag atccccatct tctcagcagc cgggctcccc cacaatgaga ttgccgctca
661 gatctgccgc caggcggggc tggtgaagaa gtccaaggct gtgctggatt accatgacga
721 caacttcgcc atcgtctttg cagccatggg ggtgaacatg gagacagcca gattcttcaa
781 gtctgacttt gagcagaatg gaaccatggg gaacgtctgc ctcttcctga acttggccaa
841 tgaccccacg atcgagcgga tcatcacccc gcgcctggcg ctgaccactg ctgaattcct
901 tgcctaccag tgtgagaagc atgtgctggt catactgacg gacatgagtt cctatgcaga
961 ggccttgcgg gaggtctctg ctgctagaga ggaggtgcct gggcgccgag ggtttcctgg
1021 atatatgtac acagacctgg ccaccatcta cgagcgggcg ggccgtgtgg agggtcgggg
1081 aggatccatc acacagatcc ccatcctcac catgcccaac gacgatatca cccaccctat
1141 cccagacttg acgggcttca tcacagaggg acagatctac gtggacagac agcttcacaa
1201 cagacagatc taccccccca tcaacgtgct cccttccctg tcgcggctga tgaagtcagc
1261 cattggggaa ggcatgacaa gaaaggacca tggagatgtc tccaaccagc tgtacgcctg
1321 ctatgccatc gggaaggacg tgcaggccat gaaggcagta gttggggagg aggcgctcac
1381 ctctgaggac ctgctctacc tggaattcct gcagaagttt gagaagaact tcatcaatca
1441 gggcccctac gagaaccgct cggtgttcga gtcgctggac ctgggctgga agctgctgcg
1501 catcttcccc aaggagatgc tgaagcgcat tccgcaggcc gtgatcgacg agttctattc
1561 ccgcgagggg gcgctgcagg acctcgcgcc tgacactgcg ctctagcccc gcgcgccgtg
1621 gcaccccaac accggcaggg aacctaccct cggctcccgg gtctcccctc cctcgccacc
1681 ccaaccagcg gcttctgcgc cgccctccgc cctccgctgg ctccgaggtg gtgggggcgc
1741 cgcacgctcc atccctttcc ctcgctcgat tccttttccc gcgctccatg cctccccctc
1801 gactcccggt gctgcggaag aactgaaggt tgcgatgcct tactctgacg ggagcatctg
1861 tatttttatg ttaaaagccc acaaaataaa aataaaaagt aactgagatg aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//