LOCUS BC063113 2371 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens poly(A) binding protein, cytoplasmic 5, mRNA (cDNA
clone MGC:71926 IMAGE:6452933), complete cds.
ACCESSION BC063113
VERSION BC063113.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2371)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2371)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18201887.
FEATURES Location/Qualifiers
source 1..2371
/db_xref="H-InvDB:HIT000260760"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71926 IMAGE:6452933"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2371
/gene="PABPC5"
/gene_synonym="PABP5"
/db_xref="GeneID:140886"
/db_xref="HGNC:HGNC:13629"
/db_xref="MIM:300407"
CDS 219..1367
/gene="PABPC5"
/gene_synonym="PABP5"
/codon_start=1
/product="poly(A) binding protein, cytoplasmic 5"
/protein_id="AAH63113.1"
/db_xref="GeneID:140886"
/db_xref="HGNC:HGNC:13629"
/db_xref="MIM:300407"
/translation="MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPL
RFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRK
SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANR
AIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKEL
FCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQK
KIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM
MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRRC"
BASE COUNT 686 a 448 c 522 g 715 t
ORIGIN
1 gggggcgcgt ttgccagtca gtctctccgg acctgcctcg agcctcaggc tgctgaaatc
61 accgcgcctc actcgcctcg acagtgattc tgagtctgct tttagcttcc ttttgcctgc
121 cttggctttt tctgttcgtg aacagctgtt tggcccatag cttagagaaa gcagcctttt
181 ttctcttcaa agagaacctc ctcccagtgc tcagagagat ggggagcggg gagcctaatc
241 ctgctggcaa gaaaaagaag tatctcaagg ccgctctgta cgtgggtgac ttggacccag
301 atgtcaccga ggacatgctc tataagaagt tcaggcctgc tggccctctg cgattcaccc
361 gaatctgccg tgatccggtg acccgcagcc ccctgggcta tgggtatgtt aacttccgct
421 ttcccgcgga tgcagagtgg gccttgaaca ccatgaattt tgatttgatt aatggaaaac
481 cattccgcct tatgtggtct cagccagatg accgcttaag aaagtctgga gtgggaaata
541 tattcatcaa aaacctggac aaatccatag acaatagggc cctgttttac ttattttctg
601 cttttgggaa cattctgtcc tgcaaagtcg tatgcgatga caacggctct aagggttatg
661 cctatgttca ctttgacagc ctggccgctg ccaatagagc catctggcac atgaatggag
721 tgcggctcaa caaccgccag gtgtatgttg gcagattcaa attcccagaa gagcgggcgg
781 ctgaggtcag aaccagggat agagcaactt tcaccaatgt tttcgttaaa aacattggag
841 acgacataga tgacgaaaaa ctgaaggaac ttttctgtga atatgggcca actgagagtg
901 ttaaagtaat aagagatgcc agtgggaaat ctaaaggctt tggatttgtg agatatgaga
961 cacacgaggc tgcccaaaag gctgtgctag acttgcatgg aaagtccatc gatggaaaag
1021 tcctctatgt agggcgagca cagaagaaaa ttgaacgcct ggctgagttg aggcggagat
1081 ttgaacggct gaggttaaaa gaaaaaagtc ggcccccagg ggtgcctatc tatattaaga
1141 acttggatga gacaatcaat gatgaaaaac tgaaggagga attttcttcc tttgggtcaa
1201 ttagtcgggc caaagtgatg atggaagtgg ggcaaggcaa aggatttggt gtggtctgct
1261 tttcctcttt tgaagaggct accaaagcag tggatgagat gaatggccgc atagtgggct
1321 ccaagcccct gcatgtcacc ctgggccagg ccaggcgcag gtgctgagaa taagaatgct
1381 cagtttgttt cagccttagt tggtgcctcc ttagtttggg ctcctttgtg ataaggggtt
1441 attttatgct aattcacaag tttttttttg aagtgaattc ttttgaaaaa aaaatgcaaa
1501 actagaaaac tttattcatt ttagaataga acataatttc taactgtaaa attgtcattt
1561 tgtacttttt ttgatgtaat atccttagaa atctgtagaa taaagtgtat tcctccactt
1621 ttttttcctg aacagtcaag gtgaggcaat tgattgagta tatttccctt cttatttcag
1681 taatactcta ttttttttca tgaaaatgtc aacatggttc ttctgaatct atcacagtga
1741 aaagttctaa cttgtttttg agaagtcagt acagcagggg aaaacatatg tgatgcaatt
1801 aacatctgca taatttcact taaaattatt atgcaaaaat gaatgttttt tcaaaaaatg
1861 tgaaatgtat tttattttct ttatttgtat tcttgtttca ttttttaata tgttgtgaac
1921 atgctacaga tttgatagta cttttgacta aatgttggga gtggtcgtat taacttcttg
1981 cccaaagaag taagcatatt ggtgttttct caattagtca ctgagaaaat taacacttta
2041 ggcagtggct atttaaagta ggaattgcat cttaaaaacc tttcctaaga gatttggtat
2101 gtgaggatac tttcagtacc actcctacca ttcatttttc taaattcctt agtacatata
2161 cttggatcat gttaaattaa caagaaagat gaataactgc gctgaattgc ctttacctat
2221 aaataattta atattttacc ttcgggtttt atcaactgtc aatataaaag gcagtactcc
2281 acagaatgat gttgaaaaac ttcttcgaag aacaccttct attaaacttg ttatctcttg
2341 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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