LOCUS BC062735 629 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens barrier to autointegration factor 2, mRNA (cDNA clone MGC:72082 IMAGE:6591888), complete cds. ACCESSION BC062735 VERSION BC062735.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 629) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 629) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: n Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62632762. FEATURES Location/Qualifiers source 1..629 /db_xref="H-InvDB:HIT000260626" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:72082 IMAGE:6591888" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..629 /gene="BANF2" /gene_synonym="BAF-L" /gene_synonym="BAF-Like" /gene_synonym="BAF2" /gene_synonym="BAFL" /db_xref="GeneID:140836" /db_xref="HGNC:HGNC:16172" CDS 266..538 /gene="BANF2" /gene_synonym="BAF-L" /gene_synonym="BAF-Like" /gene_synonym="BAF2" /gene_synonym="BAFL" /codon_start=1 /product="barrier to autointegration factor 2" /protein_id="AAH62735.1" /db_xref="GeneID:140836" /db_xref="HGNC:HGNC:16172" /translation="MDDMSPRLRAFLSEPIGEKDVCWVDGISHELAINLVTKGINKAY ILLGQFLLMHKNEAEFQRWLICCFGATECEAQQTSHCLKEWCACFL" BASE COUNT 174 a 163 c 151 g 141 t ORIGIN 1 ggggggccta agacataagc tgaacctctg gcctgcagtt ccagatccaa ggtgactgag 61 acaaactgcc ggctgccact ggcttatcag gagcacctga atctgctgac acatcaaggc 121 cacttttctt aggagccccc tgacttccaa aatcagtgcc tttggattca tctcttccgg 181 gagagttcag tgtcttctga aatgttacaa aacgtccttc agagcaagaa ggcgtacacg 241 aggagctcga ctctgtagaa aggagatgga cgacatgtct cccaggctga gagccttcct 301 ctccgaaccc attggagaaa aggatgtctg ctgggtggat ggcatcagcc atgagctcgc 361 gatcaatttg gtcaccaaag gtatcaataa ggcctacatc ctgctgggac aattccttct 421 gatgcacaag aatgaagccg agtttcagag gtggctcatt tgctgttttg gtgccactga 481 gtgtgaggcc cagcagactt ctcactgcct caaggagtgg tgtgcctgct tcctgtagac 541 acaaacctca ttgctgcccc ccaccaccct ctggggaaaa tgacgccttc tccacctgta 601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //