LOCUS BC062704 971 bp mRNA linear HUM 19-NOV-2007
DEFINITION Homo sapiens immunoglobulin kappa locus, mRNA (cDNA clone MGC:71990
IMAGE:30353269), complete cds.
ACCESSION BC062704
VERSION BC062704.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 971)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 971)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..971
/db_xref="H-InvDB:HIT000260595"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71990 IMAGE:30353269"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..971
/gene="IGK@"
/gene_synonym="IGK"
/db_xref="GeneID:50802"
/db_xref="HGNC:HGNC:5715"
CDS 37..747
/gene="IGK@"
/gene_synonym="IGK"
/codon_start=1
/product="IGK@ protein"
/protein_id="AAH62704.1"
/db_xref="GeneID:50802"
/db_xref="HGNC:HGNC:5715"
/translation="METPAQLLFLLLLWLPDTTGEIVLTQSPGTLSFSPGERATLSCR
ASQTVFSSHLAWYQQRPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTITRLEPE
DFAVYFCQQYGTSPSLTFGGGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN
FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV
THQGLSSPVTKSFNRGEC"
BASE COUNT 249 a 285 c 228 g 209 t
ORIGIN
1 ggggaagagc tgctcagtta ggacccagag ggaaccatgg aaaccccagc gcagcttctc
61 ttcctcctgc tactctggct cccagatact accggagaaa ttgtgttgac gcagtctcca
121 ggcaccctgt ctttctctcc aggggaaaga gccaccctct cctgcagggc cagtcagact
181 gtttttagca gtcacttagc ttggtaccaa cagaggcctg gccaggctcc caggctcctc
241 atctatggtg catccagcag ggccactggc atcccagaca ggttcagtgg cagtgggtct
301 gggacagact tcactctcac catcaccaga ctggaacctg aagattttgc agtgtatttc
361 tgtcagcagt atggtacctc accttccctc actttcggcg gagggaccag ggtggagatc
421 aaacgaactg tggctgcacc atctgtcttc atcttcccgc catctgatga gcagttgaaa
481 tctggaactg cctctgttgt gtgcctgctg aataacttct atcccagaga ggccaaagta
541 cagtggaagg tggataacgc cctccaatcg ggtaactccc aggagagtgt cacagagcag
601 gacagcaagg acagcaccta cagcctcagc agcaccctga cgctgagcaa agcagactac
661 gagaaacaca aagtctacgc ctgcgaagtc acccatcagg gcctgagctc gcccgtcaca
721 aagagcttca acaggggaga gtgttagagg gagaagtgcc cccacctgct cctcagttcc
781 agcctgaccc cctcccatcc tttggcctct gacccttttt ccacagggga cctaccccta
841 ttgcggtcct ccagctcatc tttcacctca cccccctcct cctccttggc tttaattatg
901 ctaatgttgg aggagaatga ataaataaag tgaatctttg gaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa a
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