LOCUS BC062687 1101 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens ADAM metallopeptidase domain 17, mRNA (cDNA clone
IMAGE:6104599), complete cds.
ACCESSION BC062687
VERSION BC062687.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11497003
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1101
/db_xref="H-InvDB:HIT000260578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6104599"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1101
/gene="ADAM17"
/gene_synonym="CD156b"
/gene_synonym="cSVP"
/db_xref="GeneID:6868"
/db_xref="HGNC:HGNC:195"
/db_xref="MIM:603639"
CDS 170..799
/gene="ADAM17"
/gene_synonym="CD156b"
/gene_synonym="cSVP"
/codon_start=1
/product="ADAM17 protein"
/protein_id="AAH62687.1"
/db_xref="GeneID:6868"
/db_xref="HGNC:HGNC:195"
/db_xref="MIM:603639"
/translation="MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDI
LSLSNIQQHSVRKRDLQTSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGK
NESEYTVKWQDFFTGHVVGEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTK
DKRMLVYKSEDIKNVSRLQSPKVCGYLKVDNEELLPKGLVDREPPEGKT"
BASE COUNT 363 a 194 c 266 g 278 t
ORIGIN
1 gggggtcgag cctggcggta gaatcttccc agtaggcggc gcgggaggga aaagaggatt
61 gaggggctag gccgggcgga tcccgtcctc ccccgatgtg agcagttttc cgaaaccccg
121 tcaggcgaag gctgcccaga gaggtggagt cggtagcggg gccgggaaca tgaggcagtc
181 tctcctattc ctgaccagcg tggttccttt cgtgctggcg ccgcgacctc cggatgaccc
241 gggcttcggc ccccaccaga gactcgagaa gcttgattct ttgctctcag actacgatat
301 tctctcttta tctaatatcc agcagcattc ggtaagaaaa agagatctac agacttcaac
361 acatgtagaa acactactaa ctttttcagc tttgaaaagg cattttaaat tatacctgac
421 atcaagtact gaacgttttt cacaaaattt caaggtcgtg gtggtggatg gtaaaaacga
481 aagcgagtac actgtaaaat ggcaggactt cttcactgga cacgtggttg gtgagcctga
541 ctctagggtt ctagcccaca taagagatga tgatgttata atcagaatca acacagatgg
601 ggccgaatat aacatagagc cactttggag atttgttaat gataccaaag acaaaagaat
661 gttagtttat aaatctgaag atatcaagaa tgtttcacgt ttgcagtctc caaaagtgtg
721 tggttattta aaagtggata atgaagagtt gctcccaaaa gggttagtag acagagaacc
781 acctgaaggt aagacttaaa gagtgtattt caaataagaa acaaacatac tacaattgac
841 ttcagtaggg gtggttgtta tttgttaaaa agtaacatga ttgtcaagta actatagtat
901 ttggcatgaa aataagaggt ttgttccaga aattttcatc ttcttttgtt tataatgtaa
961 gagttgaaaa ctctggaaaa taatgggaac aacagagatt agactttaaa aaagattagg
1021 gaaaagggaa atggagtgat ctgagggaaa atattcctgc agatatttag aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa a
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