LOCUS BC062628 2295 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens translin-associated factor X interacting protein 1,
mRNA (cDNA clone IMAGE:5227139), with apparent retained intron.
ACCESSION BC062628
VERSION BC062628.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2295)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2295)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923845
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2295
/db_xref="H-InvDB:HIT000260538"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5227139"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 618 a 580 c 672 g 425 t
ORIGIN
1 ggcctctgtt catccccctg cctcagttct ggtacctggg gtcaaatcgg ctgtagtggt
61 tgactctcag ggcacccgct gccgggtccc agtccacctt tgctactttg tcctactccc
121 agcccgcggg cgctaggctc gggggcgtgg cgcatccctg actccgcccc cgccgcgggg
181 gggcctctgg ggcctggtcg ccatggcgac cggctgtacg ctaccacagc ttcccaggcc
241 gcgggtgctg attgcccgcc tgcccgtggg tcatggcctg ccagcagtcg cggtaccaca
301 gcttctcgtc cgcgtcgaga ttacagccac ggccttcagg agtgaccata gacgaatcct
361 ttctcacaga agacaagagc acccagaatc gcaagcttct tcagaaacga aggacgctgc
421 ccaccaaagg gagaagattc gggctctgga gcccctgaag gccaagcttg tcactgtgaa
481 tgaggactgc aatgagagga tcctggccat gagagctgag gagaaatatg aaatctccct
541 gctcaagaaa gagaagatga acttgctaaa actcatcgac aaaaagaatg aggagaagat
601 ttcattgcag agcgaggtga ccaaactgag gaagaacttg gctgaggagt acctgcacta
661 cctcagtgag cgagatgcct gtaagatcct catcgcagac ctgaatgagc tgcggtacca
721 gcgggaggac atgtcattag cccagtcgcc aggcatctgg ggggaggacc ctgtgaagtt
781 aaccctggct cttaagatga cccggcaaga cctgacccgc acgcagatgg aactcaacaa
841 catgaaggcc aactttggag atgtggtccc caggagggac tttgaaatgc aggagaagac
901 caacaaggat cttcaggagc aggtgctggc aggcaggcag ggccaggagg gtaggacggg
961 gtctcacagg tggggggcca gggccaatgt ccttgcccac agctggacac cctgagagcc
1021 agctacgagg aggttcgcaa ggagcatgag atcctcatgc agctgcacat gagcacgctg
1081 aaggaacggg accaattctt ctctgagctg caggagatcc agcgcacttc cacgccgcgg
1141 cctgactgga ccaagtgcaa agatgtggtg gctgggggcc cagagcgctg gcagatgctg
1201 gctgagggca agaacagcga ccagctggtg gacgtgctcc tggaagagat tggttcgggg
1261 ctgctgcggg agaaagactt cttccctggt ctgggctatg gggaagccat ccctgctttt
1321 cttcggtttg atggcctcgt ggagaacaag aagccaagca agaaggacgt ggtcaacctc
1381 ctcaaggatg cctggaagga acgtcttgct gaggagcaga aagagacgtt cccagatttc
1441 ttcttcaatt tcctggagca tcgctttggg cccagtgatg ccatggcctg ggcttatact
1501 atttttgaaa atatcaagat cttccactcc aacgaggtta tgagtcagtt ctatgcagtc
1561 ttgatgggaa agcggagtga gaatgtgtat gtcacccaga aggagacagt agcccagctg
1621 ctgaaggaga tgacaaatgc tgacagtcag aacgaggggc tactaaccat ggagcagttc
1681 aacactgtcc tcaagagtac cttccctctc aagacagaag agcaaatcca ggagctgatg
1741 gaggcagggg gctggcatcc cagcagcagc aatgcagact tgctcaacta ccgctcactg
1801 tttatggagg atgaggaggg ccagagtgag ccctttgtgc aaaaactctg ggaacaatac
1861 atggatgaga aggacgagta cttacagcag ctaaagcagg agcttggcat agaactccat
1921 gaggaagtga ctctgcccaa gctgcgaggg ggcctgatga ccatcgaccc cagcctggac
1981 aagcagacag tgaacaccta catgagccag gccttccagc tccctgagtc ggaaatgcca
2041 gaggagggtg acgagaagga agaagccgtg gtggaaatcc tccagactgc cctggagcgg
2101 cttcaggtga ttgacatcag gcgtgtggga cctcgagagc cagagcctgc aagctaggaa
2161 cttgtgggca gcctgcgtac tccagtcctg ctaaccccta gcttttaata taaaagtgtt
2221 tgtctgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaa
//