LOCUS BC062621 2426 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens tetratricopeptide repeat domain 21A, mRNA (cDNA clone
IMAGE:5199714), with apparent retained intron.
ACCESSION BC062621
VERSION BC062621.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21955236
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2426
/db_xref="H-InvDB:HIT000260531"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5199714"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 646 a 583 c 614 g 583 t
ORIGIN
1 gtttccaagg tctgtaacgc cttcaaccgc ccgccgcgat agagtgccca cgaccctgcc
61 tcgggaatcc cgctctgcac cgccccacca gacccggact cggagccgcg agcggcccga
121 gatgagcagc aatgactcct cccttatggc tgggatcatt tactatagcc aggaaaagta
181 cttccaccat gtgcagcagg ctgcagctgt gggcctggaa aaattcagca atgaccctgt
241 gttgaagttc tttaaagcct atggagtcct caaagaagag cacatccagg atgccatcag
301 tgacctggaa agcatcaggc atcacccaga cgtgtccctg tgctccacca tggccctcat
361 ttatgctcac aaaagatgtg aaatcattga ccaagaagca attcaggagc ttgagtacag
421 cctgaaggaa atacgcaaga cactcagtgg gactgcactg tactatgctg gccttttcct
481 ctggctcata ggccgccatg acaaggccaa agagtacatt gaccgcatgc tgaagatttc
541 tagaggcttc agagaggcct atgtgctcag aggctgggtg gacctgacct cagacaagcc
601 ccacactgcg aagaaagcca ttgagtacct ggaacaagga attcaggaca ccaaagatgt
661 gctggggctg atgggaaagg caatgtactt catgatgcag cagaactact cagaggccct
721 ggaggtggtg aaccagatca ctgtgacttc agggagcttc ctgccagccc tcgtcctgaa
781 gatgcagctg ttcttagctc ggcaggactg ggagcagaca gtagaaatgg gacacagaat
841 cctagaaaaa gatgagagca atattgatgc ctgccaaatt ctaaccgtgc atgagcttgc
901 aagagaagga aacatgacca cagtaagttc tttgaagact cagaaggtga tccttgaaac
961 agaatcaagg aggaaccctt catgacctgt gcacctgacc caaagccctt gtagggagct
1021 cctggatctc agcttcctct tttctacccc acccctatac tcgctgccaa ggaggcctgc
1081 tctggtttga ctctttgagt tgtgtagctt gggagtcagg cagcatcagg cagtgagatt
1141 gattctaggc tctgccatgt gctatctgtg gaagcctggg caggtgtccc cacctggata
1201 agccgcaggc ttcctgtttg taaaatagac agaattccac acaggactaa atgtgataag
1261 aagtgggaga gtttggaaca gtccctggca cactacagta attccatcaa tgttaactga
1321 tagtagaagt cgtggtagta tttctgaatt caggaaatgc ctttttttta ggggatagtt
1381 ggaactgctc aggcattggc caggtaatac tgggccccaa acatgctcgt aagtcttgta
1441 gttttccaaa gaaaccaaaa atagccctca aatgcagtca gaaacaccta gaattcttag
1501 tgaaacctca atacccagac aggttctcat tttcagaaag gtttgttttt agccaaagca
1561 ttgcctttta gatcagtgaa atatattgcc tctatggaga gcatggcaaa ccaggagtct
1621 ctaaggggtc atggtgggaa ggggaagctt ctggtttctt ctgcacagct ctgagattgt
1681 ggattttgtg ggatggggtg aggtagaggg gagagtccat atttgggaga aaaaggcccc
1741 agcccttttc gtctctgggt aggaataaga gaataggact atcctcagct ccctgtgact
1801 ccagatccct aagcaggcct tcctggggcc tggcctgaaa gttaatccca ggggcagact
1861 tagcatttag ctaactgaga tttagcatta gccccttttt tactcccact tcaaaccttg
1921 ggacctcccc accgaccccg ggctggctac ccagttctaa ttttgttcat acttactgaa
1981 cagagtggac ccataccatc cttggttttg cttttggcac ttctctgcag ctgggaacta
2041 agaattcctt actcctgggt ggggagtggg aaagaaccta agctttggaa tctgtcagtg
2101 acctaggtgg ctgggtgacc tcagaccaat tgcctaacct ttctaacctt tcatgtgttg
2161 gacaggaagg tttggaaagt tcgaatagtt atactgactt acatttgatt catgtcaaaa
2221 tggagcagag gcttctgggc cagcactagt tagtctgctg ctggcctggc aggctgcact
2281 gtggacacag tgagggctag ctcctggctc tgcctgggtg ggtctgaaaa ggcaacttct
2341 cttcacaaac tcaggaacag ggctactcta tgggttagcc ctgctccata aggagcagtc
2401 aaaaaaaaaa aaaaaaaaaa aaaaaa
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