LOCUS BC062552 3126 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens zinc finger protein 84, mRNA (cDNA clone MGC:71238
IMAGE:6536224), complete cds.
ACCESSION BC062552
VERSION BC062552.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3126)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3126)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4508036.
FEATURES Location/Qualifiers
source 1..3126
/db_xref="H-InvDB:HIT000260464_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71238 IMAGE:6536224"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..3126
/gene="ZNF84"
/gene_synonym="HPF2"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
CDS 220..2436
/gene="ZNF84"
/gene_synonym="HPF2"
/codon_start=1
/product="ZNF84 protein"
/protein_id="AAH62552.1"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
/translation="MTMLQESFSFDDLSVDFTQKEWQLLDPSQKNLYKDVMLENYSSL
VSLGYEVMKPDVIFKLEQGEEPWVGDGEIPSSDSPEVWKVDGNMMWHQDNQDKLKIIK
RGHECDAFGKNFNLNMNFVPLRKSNSEGDLDGLILKHHLDLLIPKGDYGKAESDDFNV
FDNFFLHSKPEDTDTWLKYYDCDKYKESYKKSQIIIYHRNRLGEKLYECSECRKRFSK
KPSLIKHQSRHIRDIAFGCGNCGKTFPQKSQFITHHRTHTGEKPYNCSQCGKAFSQKS
QLTSHQRTHTGEKPYECGECGKAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNL
INHQRIHTGEKPFECRECGKAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIR
HQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISHQ
MTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRI
HTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTHT
GEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGE
KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKP
YGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKKS"
BASE COUNT 1097 a 572 c 695 g 762 t
ORIGIN
1 cgggcgcgcg ggcgcgactc ggcggcggcg tcttttatcc tggtccctac aaataagcct
61 gctcatgtga gataagaaag gagttcctgg aaccaggaat tcattctcag tgtagaagac
121 ctagctgaga cctcactcca cagttttggg gcagaagcag aagagacgca cagtagaacc
181 gatctcagcc ttgctgatca tctcgtacag cagcagaaaa tgaccatgtt acaggagtca
241 ttctcatttg acgatttatc tgtggacttc acccaaaagg agtggcagct actggatccc
301 tctcagaaga atttatacaa ggatgtgatg ttggagaact atagcagcct agtgtcactg
361 gggtatgaag ttatgaaacc agatgtcatc ttcaaattgg agcaaggaga agagccgtgg
421 gtaggagatg gagaaattcc aagttcagat tctccagaag tctggaaagt agatggtaac
481 atgatgtggc accaggataa ccaagacaag cttaaaatta taaaaagagg tcatgaatgt
541 gatgcatttg gaaaaaattt caatctgaac atgaactttg ttcctttaag gaaatcaaac
601 agtgaaggtg acttagatgg attgatttta aaacatcatt tagatttgct tattccaaaa
661 ggagattatg gaaaagcaga atcagatgac tttaatgtgt ttgataattt ttttctccat
721 tccaagcctg aggatactga tacctggtta aaatactatg actgtgataa atataaagag
781 agctataaaa agtcacagat tatcatatat cataggaatc gtttagggga gaaactctat
841 gaatgcagtg aatgtaggaa gcgcttcagt aagaaaccaa gtctcattaa acatcagagc
901 agacatataa gagacatagc ctttggctgt ggtaattgtg gcaaaacctt tccccagaag
961 tctcagttta ttacacatca cagaactcat acaggagaaa aaccttataa ttgtagccag
1021 tgtgggaaag ccttctccca aaagtcacag ctcacatccc atcagcggac acatacagga
1081 gagaaacctt atgagtgtgg tgaatgtggg aaagccttct cccggaagtc acatctcata
1141 tcgcattgga gaacacacac aggagagaaa ccctatggat gcaatgaatg tgggagggcc
1201 tttagtgaaa agtccaatct cattaaccat cagagaattc ataccggtga gaagcctttt
1261 gaatgcaggg aatgtgggaa agccttcagc aggaagtcac aactcgttac acatcacaga
1321 actcacacag gaacaaaacc ctttggatgt agtgattgta gaaaagcctt ctttgagaag
1381 tcagagctta ttagacatca gacaattcat actggagaga aaccctatga atgcagcgag
1441 tgtaggaaag catttagaga gaggtcgagt ctcattaatc atcagagaac acatacagga
1501 gagaaacctc atggatgcat tcagtgtggg aaggccttct cccagaagtc acatctcata
1561 tcacatcaga tgacacacac aggagaaaaa ccctttatat gcagtaaatg tgggaaagcc
1621 ttcagcagga aatcacagct cgttagacat cagagaactc atacgggaga aaaaccgtat
1681 gaatgcagtg agtgtgggaa agctttcagt gaaaaattaa gtctcactaa tcatcaaaga
1741 attcatacag gagaaaaacc atatgtatgc agtgaatgtg ggaaagcctt ttgtcagaag
1801 tcacatctca tatcacatca gaggacacat acaggggaga aaccctatga atgcagtgaa
1861 tgtgggaagg cctttggtga gaagtcaagt cttgcaactc atcagagaac tcatactgga
1921 gaaaaaccgt atgaatgcag ggactgtgaa aaagctttct cccagaaatc acagctaaat
1981 acccatcaga gaattcacac tggagagaaa ccctatgaat gcagtctttg taggaaagct
2041 ttttttgaga agtcggagct aattagacat ctgagaactc atacaggaga aaaaccttat
2101 gaatgcaatg aatgtagaaa agccttcagg gagaagtcaa gtctcatcaa tcatcagaga
2161 atacatacag gagagaagcc ttttgaatgc agtgagtgtg gcaaagcttt ctctcggaag
2221 tcacacctta taccacatca aaggacacat acgggtgaga aaccctatgg atgcagtgaa
2281 tgtaggaagg ccttctctca gaagtcacag ctggttaatc atcagagaat tcatacagga
2341 gagaagcctt atcgatgcat tgaatgtggg aaagctttct cacagaagtc acagctcatc
2401 aatcatcaga gaactcatac agtaaaaaaa tcctaggaat acagttaata gtagtctttg
2461 acagatcatc ttggacttca ggaaatgcaa ttatgataac gtttgtagac agtcacgtca
2521 tgttaggtgt ctgtactcca tgaggatgag aactctaaat gaggtggtgt atggaaagcc
2581 gatcataatt catagagtag agtgaaccta tgactgcagt ggatctcaaa aacttttaaa
2641 accatagaca agccttatag agtagaacat tcacagcaaa gaagaatcct gtgaatgtcc
2701 aaaagccttc cagaagtcaa gtctcttaag ctattagaaa tattcccact ggggatgagg
2761 gaaaacccca tgaatgcggg aaatgaggca atatttttaa gaaatgacag ttcattgtac
2821 ataagaaaat gctcttagga atgaagttct atgaaagtac taaatatggg acagtgcaac
2881 aagtaaccag actattttgt attttggaga attcatatta tggagaacct aacaatttaa
2941 agacactggg aacacttgcc cctcagtata gtactgtcaa gggaagccat acactttttg
3001 tagacatggg taccaaaaat acccaattct aagtggttga cagatgttca ctttgaagtg
3061 tgaagtttta aaaatacgtg aataaattgg ttattgaaac atctaaaaaa aaaaaaaaaa
3121 aaaaaa
//