LOCUS BC062541 1812 bp mRNA linear HTC 15-NOV-2004
DEFINITION Homo sapiens RAB GTPase activating protein 1-like, mRNA (cDNA clone
IMAGE:5925319), with apparent retained intron.
ACCESSION BC062541
VERSION BC062541.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1812)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1812
/db_xref="H-InvDB:HIT000260454"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5925319"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
BASE COUNT 456 a 396 c 493 g 467 t
ORIGIN
1 gagagtcaag agctggcttg gtaaagtctt aaagaatgga gaagaggagg aaggagagaa
61 gggaagaaag agggagaatc catgggaaag agctatgatg ggagagctta tgtcatcact
121 ggcatgtgga accccaatgc accagtattt ctggcactta acgaggaaac cccaaaagat
181 aagcaagtat acatgactgt ggcagtggat atggtagtca cagaggtggt ggagcctgtt
241 cgctttctcc tggagacagt agtccgtgtg taccctgcaa atgagcgatt ttggtatttc
301 agcagaaaga ctttcacaga gactttcttc atgagattga aacagtctga gggaaaaggc
361 cataccaatg ctggagatgc aatatatgag gtggtgagtc tacagcgaga gtctgacaag
421 gaggaaccag tcactcctac tagtggaggg ggtccaatgt caccccagga tgatgaagca
481 gaagaggaga gtgataatga actctcaagt ggaacaggtg atgtgtctaa ggattgtcct
541 gagaagatcc tgtattcttg gggagagttg ctaggaaaat ggcacagtaa ccttggtgca
601 cgaccgaaag ggctgtctac tctggtgaag agtggtgtcc ctgaagcatt gagggcagag
661 gtatggcagt tattggcagg ctgccatgac aaccaggcaa tgctggatag ataccgaatt
721 cttatcacaa aggtctgttg gagtttgctg gaggtccact ccagaccctg tttgcctggg
781 tatcaccagt ggaagctgca gaacagcaaa tattgcagaa tggcaaatgt tgctgcctga
841 tccttcctct ggaagcttca tctcagaagg gcacctggct gtatgaggtg tcggttggcc
901 cctcctggga ggtgtctccc aattagacta ctcaggtgtc agggacccac ttgaggaggc
961 agtctgtcca ttctcaggtc ccaaactaca tgctgggaga accactactc tcttcaaagc
1021 tgtcagacag ggacatttaa gtctgcagaa gtttctgctg ccgtttgttc aactatgccc
1081 tgcccccagt actggagtcc aggaaggcag gcaggcctcc ttgagctttg gtgggctcca
1141 cccagttcag tcttcccggc tgctttgttt acctactcaa gcttcagcaa tggcggatgc
1201 ccctccctca gccttgctga caccttgcgg cttgatctca gactgctgtg ttagcagtga
1261 gtgaggctcc gtgggtgtgg gactctccga gccaggtgcg ggatataatc tcctggtgtt
1321 ccgtttgcta agaccattgg aaaagcgcag tattagggtg ggagggtccc gattttccag
1381 gtactatctg tcatggcttc ccttggctag gaaagggaat tccccaaccc cttgcacttc
1441 ccaggtgagg caatgcccca cgctgctcct tgggctgcac ccactgtgtg acaagcccca
1501 gtgagatgaa cccggtacct ctgttggaaa tgcagaaatc acctgtcttc tgcgtcgctc
1561 acgctgggag ctgtagactg gagctgttcc tttttggcca tcttggaacc tcggttcaaa
1621 cctgagttgt aatactcact cttcctgttg ctgcctatgt aattttgtag aagttaccta
1681 attgcttcca agcttctgtt ggattttttg agaactgaat gacatagtac attttgaatg
1741 cttaatgtat tgctttgtgc atggtattat ttaataaata ttagctttgg ttataaaaaa
1801 aaaaaaaaaa aa
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