LOCUS BC062536 1734 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens AT rich interactive domain 4B (RBP1-like), mRNA (cDNA
clone IMAGE:5014918), partial cds.
ACCESSION BC062536
VERSION BC062536.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22035676.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000260450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5014918"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1734
/gene="ARID4B"
/gene_synonym="BCAA"
/gene_synonym="BRCAA1"
/gene_synonym="RBBP1L1"
/gene_synonym="SAP180"
/db_xref="GeneID:51742"
/db_xref="HGNC:HGNC:15550"
/db_xref="MIM:609696"
CDS 449..>1734
/gene="ARID4B"
/gene_synonym="BCAA"
/gene_synonym="BRCAA1"
/gene_synonym="RBBP1L1"
/gene_synonym="SAP180"
/codon_start=1
/product="ARID4B protein"
/protein_id="AAH62536.1"
/db_xref="GeneID:51742"
/db_xref="HGNC:HGNC:15550"
/db_xref="MIM:609696"
/translation="MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRH
DSSTVEVQDDHIKGPLKVGAIVEVKNLDGAYQEAVINKLTDASWYTVVFDDGDEKTLR
RSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSD
EDEDDRKQIDELLGKVVCVDYISLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFK
DGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWKTELKEDSSSS
EAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLG
YRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYG
FEEYCRSANIEFQMALPEKVVNKQCKECENVKKKKK"
BASE COUNT 536 a 340 c 456 g 402 t
ORIGIN
1 gtcgagtccg gagtgaggag ctcggtcgcc gaagcggagg gagactcttg agcttcatct
61 tgccgccgcc acggccaccg cctggacctt tgcccggagg gagctgcaga gggtccatcg
121 ccgccgtcct ctggagggca gcgcgattgg gggcccggac ctccagtccg ggggggattt
181 ttcgtcgtcc ccctcccccc aaccagggag cccgagcggc cgccaaacaa aggtaccagt
241 cgccgccgcg ggaggaggag gagccggagc ctctgcctca gcagccgctg gacccgccgc
301 ccttcttccc catctctccc ccgggcctgc tggttttggg ggggagaagg agagagggga
361 ctctggacgt gccagggtca gatctcgcct ccgaggaagg tgcagctgaa cctggtgttt
421 tagaggatac cttggtccca gagtcatcat gaaggccctt gatgagcctc cctatttgac
481 agtgggcact gatgtgagtg ctaaatacag aggagccttt tgtgaagcca agatcaagac
541 agcaaaaaga cttgtcaaag tcaaggtgac atttagacat gattcttcaa cagtggaagt
601 tcaggatgac cacataaagg gcccactaaa ggtaggagct attgtggaag tgaagaatct
661 tgatggtgca tatcaggaag ctgttatcaa taaactaaca gatgcgagtt ggtacactgt
721 agtttttgat gacggagatg agaagacact gagacgatct tcactgtgcc tgaaaggaga
781 gaggcatttt gctgaaagtg aaacattaga ccagctccca ctcaccaacc ctgagcattt
841 tggcactcca gtcataggaa agaaaacaaa tagaggaaga agatctaatc atataccaga
901 ggaagagtct tcatcatcct ccagtgatga agatgaggat gataggaaac agattgatga
961 gctactaggc aaagttgtat gtgtagatta cattagtttg gataaaaaga aagcactgtg
1021 gtttcctgca ttggtggttt gtcctgattg tagtgatgag attgctgtaa aaaaggacaa
1081 tattcttgtt cgatctttca aagatggaaa atttacttca gttccaagaa aagatgtcca
1141 tgaaattact agtgacactg caccaaagcc tgatgctgtt ttaaagcaag cctttgaaca
1201 ggcacttgaa tttcacaaaa gtagaactat tcctgctaac tggaagactg aattgaaaga
1261 agatagctct agcagtgaag cagaggaaga agaggaggag gaagatgatg aaaaagaaaa
1321 ggaggataat agcagtgaag aagaggaaga aatagaacca tttccagaag aaagggagaa
1381 ctttcttcag caattgtaca aatttatgga agatagaggt acacctatta acaaacgacc
1441 tgtacttgga tatcgaaatt tgaatctctt taagttattc agacttgtac acaaacttgg
1501 aggatttgat aatattgaaa gtggagctgt ttggaaacaa gtctaccaag atcttggaat
1561 ccctgtctta aattcagctg caggatacaa tgttaaatgt gcttataaaa aatacttata
1621 tggttttgag gagtactgta gatcagccaa cattgaattt cagatggcat tgccagagaa
1681 agttgttaac aagcaatgta aggagtgtga aaatgtaaaa aaaaaaaaaa aaaa
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