LOCUS       BC062472                1448 bp    mRNA    linear   HUM 03-JAN-2005
DEFINITION  Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 9,
            mRNA (cDNA clone IMAGE:30407790), complete cds.
ACCESSION   BC062472
VERSION     BC062472.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Michael Brownstein
            cDNA Library Preparation: Invitrogen Corp
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
            Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
            Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
            Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
            Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
            Schein, Asim Siddiqui, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 141 Row: p Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 27477114
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1448
                     /db_xref="H-InvDB:HIT000260435"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:30407790"
                     /tissue_type="White Matter pool- 5 brain tissues- femoral
                     artery, olfactory tract, optic tract, cerebellar white
                     matter, cerebral white matter."
                     /clone_lib="NIH_MGC_181"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6.1"
     gene            1..1448
                     /gene="ABCA9"
                     /gene_synonym="EST640918"
                     /db_xref="GeneID:10350"
     CDS             370..858
                     /gene="ABCA9"
                     /gene_synonym="EST640918"
                     /codon_start=1
                     /product="ABCA9 protein"
                     /protein_id="AAH62472.1"
                     /db_xref="GeneID:10350"
                     /translation="MGWPDEKSMDELDLNYSIDAVRVIFTDTFSYHLKFSWGHRIPMM
                     KEHRDHSAHCQAVNEKMKCEGSEFWEKGFVAFQAAINAAIIEIATNHSVMEQLMSVTG
                     VHMKILPFVAQGGVATDFFIFFCIISFSTFIYYVSVNVTQERQYITSLMTMMGLRESA
                     FW"
BASE COUNT          454 a          293 c          286 g          415 t
ORIGIN      
        1 atgaactgtg tttctagatt tttcctccag ctttcctgag agaaacaggt caaaatgagc
       61 aagagacgca tgagcgtggg tcagcaaaca tgggctcttc tctgcaagaa ctgtctcaaa
      121 aaatggagaa tgaaaagaca gaccttgttg gaatggctct tttcatttct tctggtactg
      181 tttctgtacc tatttttctc caatttacat caagttcatg acactcctca aatgtcttca
      241 atggatctgg gacgtgtaga tagttttaat gatactaatt atgttattgc atttgcacct
      301 gaatccaaaa ctacccaaga gataatgaac aaagtggctt cagccccatt cctaaaagga
      361 agaacaatca tggggtggcc tgatgaaaaa agcatggatg aattggattt gaactattca
      421 atagacgcag tgagagtcat ctttactgat accttctcct accatttgaa gttttcttgg
      481 ggacatagaa tccccatgat gaaagagcac agagaccatt cagctcactg tcaagcagtg
      541 aatgaaaaaa tgaagtgtga aggttcagag ttctgggaga aaggctttgt agcttttcaa
      601 gctgccatta atgctgctat catagaaatc gcaacaaatc attcagtgat ggaacagctg
      661 atgtcagtta ctggtgtaca tatgaagata ttaccttttg ttgcccaagg aggagttgca
      721 actgattttt tcattttctt ttgcattatt tctttttcta catttatata ctatgtatca
      781 gtcaatgtta cacaagaaag acaatacatt acgtcattga tgacaatgat gggactccga
      841 gagtcagcat tctggtaaat catatgactc caatccatta tacagcataa acaaacagaa
      901 caacttagct ggttgactcc ttagaccagg ggtccccaag ccccaggcca cagactgcta
      961 ctggtccatg gccagttagg taccaggcca catagcagga ggtgagtggc aggcaagtga
     1021 gcaaagcttc atgtatattt acagccactc cctattgctc acattaccac ctgagctcca
     1081 cctcctgtca gaatagccac gttattagag tatcacagaa gctcaaactc tattgtgaac
     1141 tgtgtatgtg agagatctag gttgcgggct ccttatgagt atccaatgcc tgatgatctg
     1201 tcactcaaga gatctaggtt gcgggctctt tatgagtatc caatgcctga tgatctgtca
     1261 ctgtctccca tcacccccag atgggatcta gttgcaggaa aacaagctca gggttcctac
     1321 tgattctaca ttatggtaag ttgtataatt atttcattat atattacaat gtaataataa
     1381 tagaaataaa gtgcacaata aatgtaatcc acatgcatca tcccaaaaaa aaaaaaaaaa
     1441 aaaaaaaa
//