LOCUS BC062461 1264 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens growth hormone regulated TBC protein 1, mRNA (cDNA
clone IMAGE:6175472), partial cds.
ACCESSION BC062461
VERSION BC062461.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1264)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1264)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: a Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376022.
FEATURES Location/Qualifiers
source 1..1264
/db_xref="H-InvDB:HIT000260424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6175472"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1264
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
CDS <1..956
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/codon_start=3
/product="GRTP1 protein"
/protein_id="AAH62461.1"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
/translation="PEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKR
YVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPD
NVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLD
ALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICL
FVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITK
GSFVMECHTFMQKIFSEPGSLSMATVAKLRESCRARLLAQG"
BASE COUNT 310 a 306 c 344 g 304 t
ORIGIN
1 ggcctgagga cttcgacgac gccgcctacg agaagttttt ctccagctac ctggtcacgc
61 tcacccgcag ggcgatcaaa tggtcccggc tgctgcaggg cgggggcgtc cccaggagcc
121 ggacagtgaa gcgctatgtc cggaaagggg tcccgctgga gcaccgtgcc cgcgtctgga
181 tggtgctgag tggggcccag gcgcagatgg accagaatcc cggctactac caccagcttc
241 tccagggaga gagaaacccc aggctggagg acgccatcag gacagacctg aaccggacct
301 tccccgacaa cgtgaagttc cggaagacca cggacccctg cttacagagg accctgtaca
361 atgtgctgct ggcatatggg caccataacc agggagtggg ctactgccag ggaatgaatt
421 ttatagcagg atatctgatt cttataacaa ataatgaaga agaatctttt tggctgttag
481 atgctcttgt tggaagaata ctaccagatt actacagccc ggccatgctg ggcctgaaga
541 ccgaccagga ggtcctcggg gagctggtgc gggcgaagct gccggctgtg ggggccctga
601 tggagcgtct cggtgtgctg tggacgctgc tggtgtcccg ctggttcatc tgcctgtttg
661 tggacatctt gcccgtggag acagtgcttc ggatctggga ctgtttgttt aacgaaggct
721 cgaagattat cttccgggtg gccctgacct taattaagca gcaccaggag ttgattttgg
781 aagccaccag cgttccagac atttgcgata agtttaagca gataaccaaa gggagtttcg
841 tgatggagtg tcacacgttt atgcagaaaa tattttcaga acctggaagc ttatccatgg
901 ccaccgtcgc caagctccgc gagagctgca gggcccggct gctggcacag gggtgagcgt
961 gcctgtcccc tgcgttgctc gtctctacac tgacgatgcc cctttccaga gttgacactg
1021 gaccaacttt cactgctttc ctttttagtg ttgtaaatac ttgacatcac tacactttag
1081 ttgtgaattt tttaaaagag cagtttaaaa tcaggtcatt ctaccagctt ttgatgatta
1141 gctatgaagt catacttttt aaagaaaact tatttttacc tgagagatca ataatatata
1201 aaatgtgagt gtgggtttgt atctaataaa gtatgccaac acctgaaaaa aaaaaaaaaa
1261 aaaa
//