LOCUS BC062347 2740 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone
IMAGE:3689423), partial cds.
ACCESSION BC062347
VERSION BC062347.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2740)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2740)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: b Column: 7.
FEATURES Location/Qualifiers
source 1..2740
/db_xref="H-InvDB:HIT000260347"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3689423"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2740
/gene="ZNFX1"
/db_xref="GeneID:57169"
/db_xref="HGNC:HGNC:29271"
CDS <1..1343
/gene="ZNFX1"
/codon_start=3
/product="ZNFX1 protein"
/protein_id="AAH62347.1"
/db_xref="GeneID:57169"
/db_xref="HGNC:HGNC:29271"
/translation="HQCMVPGTCECPPCQRTCQNRCVHSQCKKKCGELCSPCVEPCVW
RCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPKKCRICHMDEVTQIF
FGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCPICQVPIRKNLRY
GTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPEDFLMLKEKLA
QKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEWLAKKRLSF
TSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCKFTQEDE
QLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDCGGAM
ERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM"
BASE COUNT 738 a 685 c 680 g 637 t
ORIGIN
1 ctcaccaatg catggttcct ggcacttgtg agtgcccacc ctgccagcgg acctgtcaga
61 accgctgtgt ccacagccag tgcaagaaga aatgtgggga gctgtgtagt ccctgcgtgg
121 aaccctgtgt ctggcgctgc cagcactacc agtgcaccaa actctgctct gagccctgca
181 accgaccccc atgctatgtg ccttgtacta agctgctagt ttgtggccac ccctgcattg
241 gtctctgtgg ggagccatgc cccaagaaat gccggatctg ccacatggat gaggtcaccc
301 aaatattctt tggctttgag gatgagcctg atgcccgctt tgtgcagctg gaagactgca
361 gccacatctt tgaggtgcaa gccctagacc gctacatgaa tgaacagaag gatgatgaag
421 tcgccatcag attgaaagtc tgccctatct gccaggtgcc catccgcaaa aacctgaggt
481 atggaactag cataaaacag cggctagaag agattgaaat catcaaggaa aagatccagg
541 gctcagcagg ggaaatagca accagccagg aacggcttaa ggccctgctg gagaggaaga
601 gcctcctcca ccagctgctt cctgaagact tcctgatgtt aaaggagaag ctggcccaga
661 aaaatctgtc agtgaaggac ctgggtctgg ttgagaatta catcagcttc tatgaccacc
721 tggccagcct gtgggattcc ctgaaaaaga tgcatgtctt agaagagaaa agagtgagga
781 ctcgactaga acaggtccat gagtggctgg ccaagaagcg cttgagcttc actagccagg
841 aactaagtga cctccgaagt gaaatccaga ggctcacata cctggtgaac cttctgaccc
901 gctacaagat agcagagaag aaggtgaaag atagcatagc agtagaggtc tatagtgtcc
961 agaatatcct tgagaaaaca tgtaagttca cccaagagga tgaacaactt gtgcaggaaa
1021 agatggaagc tctgaaagcc acccttccct gctctggcct gggcatctca gaggaagagc
1081 gagtgcagat tgtcagtgcc ataggttatc ctcgtggtca ctggttcaag tgccgcaatg
1141 gccatatcta tgtgattggc gattgtgggg gagccatgga gaggggcacg tgtcctgact
1201 gtaaggaagt gattggtggc acaaatcata ctctggaaag aagcaaccag cttgcttctg
1261 aaatggatgg agcccagcat gctgcctggt ctgacacggc caacaacctg atgaactttg
1321 aggagatcca ggggatgatg taggaagatg gtacaccact gccttttgcc ctcgccactg
1381 aatgactggg gccagctccc taatgaagga actgaagttt gttttttatt atcatccttt
1441 ttaggctggg cgcagtggct tacgcctgta atcccagcac tttgggaggc cgaggcaggc
1501 ggatcacgag gtcaggagtt cgagaccagc ctgaccaaca tggcgaaacc ccgtctctac
1561 taaaaataca aaaattagct gggcgttatg gcgggcgcct gtaatcccag ctacttggga
1621 ggctgaggca gaagaatcgc ttaaacccag gaggcggagg ttgcagtgag ctgagatcat
1681 gccattgcac tccagtctgg gcgacaggag caagactctg tctcaaaaaa aaaaatcatt
1741 ctttttagtc ttagcaccta cttaaggatc cacttttagg gctcacccac atttgtttct
1801 agatttaccc ctgcgctaga gtaagcactt tatctccaga actgagagca aagttaacaa
1861 atgtcacccc ttctctcctg caaattagtg gacagactcc ctggaacatg tttggggctt
1921 ccacctaggg ccacctagtg gtatctctgg gtctttactt ggtcagatgt ttattctaca
1981 ttgttcccca ggaacagagt atgagctcat tgatgcagac cgattctaat tgccaggccc
2041 taatttgcag actaactctc ataataaaca gaggcccata gttgtttatg aactgcttat
2101 cccttaaagg agcacaagaa cccctccctg ccctccttgg gcaccctgcc tccaggagat
2161 ggaggcacgt gataagacaa aagactgcac caactcaccc tgacacagtt acatagtcac
2221 tgagagtggg gaagatggga cagcccacat gctgcataag atgggcctta tgcagcaggc
2281 ccaggtcgtc attaaggagt gacccctttc ctgtaacctg cactttggga tggtagaagt
2341 ttctttacct gctgacaggt ttggtggcac tgctggttac ccctgggccc tgaatggagc
2401 taaaatcaca tttggtacca gcagcaccta tcccaagtgt gatccttcat cccaacactc
2461 cctcttggag ctgttccctg ggtagagcta gcatgccagc agcttctgca ggctccaaac
2521 ccaggccaga agccagaccc aggcctgctg cctgcatctg cattccctcc ttccagtgtt
2581 ccttagaaca gacatttagg tatctcaggt cctttctaag tgtccctttc ctatgtatgc
2641 atttcctttt tttgtcttta ctatgcactt tagcttataa agccaattaa aaacgatgat
2701 tgagaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//