LOCUS BC062327 1090 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase), mRNA (cDNA clone MGC:71185 IMAGE:5477096), complete cds. ACCESSION BC062327 VERSION BC062327.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1090) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1090) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: i Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15431331. FEATURES Location/Qualifiers source 1..1090 /db_xref="H-InvDB:HIT000260328" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71185 IMAGE:5477096" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1090 /gene="CASP1" /gene_synonym="ICE" /gene_synonym="P45" /db_xref="GeneID:834" /db_xref="HGNC:HGNC:1499" /db_xref="MIM:147678" CDS 11..946 /gene="CASP1" /gene_synonym="ICE" /gene_synonym="P45" /codon_start=1 /product="caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)" /protein_id="AAH62327.1" /db_xref="GeneID:834" /db_xref="HGNC:HGNC:1499" /db_xref="MIM:147678" /translation="MADKVLKEKRKLFIRSMGEAPQAVQDNPAMPTSSGSEGNVKLCS LEEAQRIWKQKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQN LGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVP DILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSPGVVWFKDSVGVSGNLSLPTTE EFEDDAIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEI FRKVRFSFEQPDGRAQMPTTERVTLTRCFYLFPGH" BASE COUNT 350 a 217 c 252 g 271 t ORIGIN 1 gagaaaagcc atggccgaca aggtcctgaa ggagaagaga aagctgttta tccgttccat 61 gggtgaagct cctcaggcag tgcaggacaa cccagctatg cccacatcct caggctcaga 121 agggaatgtc aagctttgct ccctagaaga agctcaaagg atatggaaac aaaagtcggc 181 agagatttat ccaataatgg acaagtcaag ccgcacacgt cttgctctca ttatctgcaa 241 tgaagaattt gacagtattc ctagaagaac tggagctgag gttgacatca caggcatgac 301 aatgctgcta caaaatctgg ggtacagcgt agatgtgaaa aaaaatctca ctgcttcgga 361 catgactaca gagctggagg catttgcaca ccgcccagag cacaagacct ctgacagcac 421 gttcctggtg ttcatgtctc atggtattcg ggaaggcatt tgtgggaaga aacactctga 481 gcaagtccca gatatactac aactcaatgc aatctttaac atgttgaata ccaagaactg 541 cccaagtttg aaggacaaac cgaaggtgat catcatccag gcctgccgtg gtgacagccc 601 tggtgtggtg tggtttaaag attcagtagg agtttctgga aacctatctt taccaactac 661 agaagagttt gaggatgatg ctattaagaa agcccacata gagaaggatt ttatcgcttt 721 ctgctcttcc acaccagata atgtttcttg gagacatccc acaatgggct ctgtttttat 781 tggaagactc attgaacata tgcaagaata tgcctgttcc tgtgatgtgg aggaaatttt 841 ccgcaaggtt cgattttcat ttgagcagcc agatggtaga gcgcagatgc ccaccactga 901 aagagtgact ttgacaagat gtttctacct cttcccagga cattaaaata aggaaactgt 961 atgaatgtct gtgggcagga agtgaagaga tccttctgta aaggtttttg gaattatgtc 1021 tgctgaataa taaacttttt tgaaataata aatctggtag aaaaatgaaa aaaaaaaaaa 1081 aaaaaaaaaa //