LOCUS BC062320 2004 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens hyaluronan and proteoglycan link protein 3, mRNA (cDNA clone MGC:71328 IMAGE:5090960), complete cds. ACCESSION BC062320 VERSION BC062320.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2004) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2004) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: g Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..2004 /db_xref="H-InvDB:HIT000260321" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71328 IMAGE:5090960" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2004 /gene="HAPLN3" /db_xref="GeneID:145864" CDS 326..1408 /gene="HAPLN3" /codon_start=1 /product="HAPLN3 protein" /protein_id="AAH62320.1" /db_xref="GeneID:145864" /translation="MGLLLLVPLLLLPGSYGLPFYNGFYYSNSANDQNLGNGHGKDLL NGVKLVVETPEETLFTYQGASVILPCRYRYEPALVSPRRVRVKWWKLSENGAPEKDVL VAIGLRHRSFGDYQGRVHLRQDKEHDVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVE LELRGVVFPYQSPNGRYQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQ DATVQYPIMLPRQPCGGPGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEK LTLTEAREACQEDDATIAKVGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGP PEPGVRSFGFPDPQSRLYGVYCYRQH" misc_feature 512..811 /gene="HAPLN3" /note="IG; Region: Immunoglobulin" /db_xref="CDD:smart00409" misc_feature 821..1108 /gene="HAPLN3" /note="LINK; Region: Link (Hyaluronan-binding)" /db_xref="CDD:smart00445" misc_feature 1124..1399 /gene="HAPLN3" /note="LINK; Region: Link (Hyaluronan-binding)" /db_xref="CDD:smart00445" BASE COUNT 352 a 591 c 620 g 441 t ORIGIN 1 gtctggcggg agcgcggggg tttttctgct gccgcttcct ttctgccctt ttaatttccc 61 cgaaatcaga ctgctgcctt ggaccgggac agctcgcggc ccccgagagc tctagccgtc 121 gaggagctgc ctggggacga tgaggaaatg gaggcacaga gaggtgaact tgcccgaagt 181 cactcagcag gatgcagtgt gtccagctcc aataccgagc ccaggtctga gtgcccagac 241 aggactccag aagatttggg gaactatcca ctgccaagtt tgccctgggg ccccagcctg 301 gcccgggtca ccctggcatg aggagatggg cctgttgctc ctggtcccgt tgctcctgct 361 gcccggctcc tacggactgc ccttctacaa cggcttctac tactccaaca gcgccaacga 421 ccagaaccta ggcaacggtc atggcaaaga cctccttaat ggagtgaagc tggtggtgga 481 gacacccgag gagaccctgt tcacctacca aggggccagt gtgatcctgc cctgccgcta 541 ccgctacgag ccggccctgg tctccccgcg gcgtgtgcgt gtcaaatggt ggaagctgtc 601 ggagaacggg gccccagaga aggacgtgct ggtggccatc gggctgaggc accgctcctt 661 tggggactac caaggccgcg tgcacctgcg gcaggacaaa gagcatgacg tctcgctgga 721 gatccaggat ctgcggctgg aggactatgg gcgttaccgc tgtgaggtca ttgacgggct 781 ggaggatgaa agcggtctgg tggagctgga gctgcggggt gtggtctttc cttaccagtc 841 ccccaacggg cgctaccagt tcaacttcca cgagggccag caggtctgtg cagagcaggc 901 tgcggtggtg gcctcctttg agcagctctt ccgggcctgg gaggagggcc tggactggtg 961 caacgcgggc tggctgcagg atgccacggt gcagtacccc atcatgttgc cccggcagcc 1021 ctgcggtggc ccgggcctgg cacctggcgt gcgaagctac ggcccccgcc accgccgcct 1081 gcaccgctat gatgtattct gcttcgctac tgccctcaag gggcgggtgt actacctgga 1141 gcaccctgag aagctgacgc tgacagaggc aagggaggcc tgccaggaag atgatgccac 1201 gatcgccaag gtgggacagc tctttgccgc ctggaagttc catggcctgg accgctgcga 1261 cgctggctgg ctggcagatg gtagcgtccg ctaccctgtg gttcacccgc atcctaactg 1321 tgggccccca gagcctgggg tccgaagctt tggcttcccc gacccgcaga gccgcttgta 1381 cggtgtttac tgctaccgcc agcactagga cctggggccc tcccctgccg cattccctca 1441 ctggctgtgt atttattgag tggttcgttt ttccttgtgg gttggagcca ttttaactgt 1501 ttttatactt ctcaatttaa attttcttta aacatttttt tactattttt tgtgggcttc 1561 tggagggttc cccgccatcc aggctggtct ccctccctta aggaggttgg tgcccagagt 1621 gggcggtggc ctgtctagaa tgccgccggg agtccgggca tggtgggcac agttctccct 1681 gcccctcagc ctgggggaag aagagggcct cgggggcctc cggagctggg ctttgggcct 1741 ctcctgccca cctctacttc tctgtgaagc cgctgacccc agtctgccca ctgaggggct 1801 agggctggaa gccagttcta ggcttccagg cgaaagctga gggaaggaag aaactcccct 1861 ccccgttccc cttcccctct cggttccaaa gaatctgttt tgttgtcatt tgtttctcct 1921 gtttccctgt gtggggaggg gccctcaggt gtgtgtactt tggacaataa atggtgctat 1981 gactgcaaaa aaaaaaaaaa aaaa //