LOCUS BC061913 1193 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens basic transcription factor 3, mRNA (cDNA clone IMAGE:4182376), with apparent retained intron. ACCESSION BC061913 VERSION BC061913.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1193) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1193) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 134 Row: b Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29126237 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1193 /db_xref="H-InvDB:HIT000260265" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4182376" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 393 a 232 c 235 g 333 t ORIGIN 1 ctgccatctt gcgtccccgc gtgtgtgcgc ctaatctcag gtggtccacc cgagacccct 61 tgagcaccaa ccctagtccc ccgcgcggcc ccttattcgc tccgacaaga tgaaagaaac 121 aatcatgaac caggaaaaac tcgccaaact gcaggcacaa gtgcgcattg gtgggaaagg 181 aactgctcgc agaaagaaga aggtggttca tagaacagcc acagcagatg acaaaaaact 241 tcagttctcc ttaaagaagt taggggtaaa caatatctct ggtattgaag aggcaagtat 301 caaattttgt tactttaaaa aacaagattt ggctgggaaa agttaacgtt aatgcattaa 361 atgggttgtt tttttttttt taacttaggg acttcaaagt ccctaagatg tgtttctacc 421 ataaattaat aaatatcagg gagctcatta agtctgaatg ctattagaat acatattcca 481 ttccaggcaa aatttcacct gtgcttcaca gtgaaatact agttagccag acttagttta 541 ataaaacatt tgtttttaaa gagactggtc agcattgcta atttaaattt ttcttttctt 601 aataggtgaa tatgtttaca aaccaaggaa cagtgatcca ctttaacaac cctaaagttc 661 aggcatctct ggcagcgaac actttcacca ttacaggcca tgctgagaca aagcagctga 721 cagaaatgct acccagcatc ttaaaccagc ttggtgcgga tagtctgact agtttaagga 781 gactggccga agctctgccc aaacaatctg tggatggaaa agcaccactt gctactggag 841 aggatgatga tgatgaagtt ccagatcttg tggagaattt tgatgaggct tccaagaatg 901 aggcaaactg aattgagtca acttctgaag ataaaacctg aagaagttac tgggagctgc 961 tattttatat tatgactgct ttttaagaaa tttttgttta tggatctgat aaaatctaga 1021 tctctaatat ttttaagccc aagccccttg gacactgcag ctcttttcag tttttgctta 1081 tacacaattc attctttgca gctaattaag ccgaagaagc ctgggaatca agtttgaaac 1141 aaagattaat aaagttcttt gcctagtaaa aaaaaaaaaa aaaaaaaaaa aaa //