LOCUS BC061887 953 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptophysin-like 1, mRNA (cDNA clone MGC:75065
IMAGE:5171714), complete cds.
ACCESSION BC061887
VERSION BC061887.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33239441.
FEATURES Location/Qualifiers
source 1..953
/db_xref="H-InvDB:HIT000260239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75065 IMAGE:5171714"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..953
/gene="SYPL1"
/gene_synonym="H-SP1"
/db_xref="GeneID:6856"
/db_xref="HGNC:HGNC:11507"
CDS 16..795
/gene="SYPL1"
/gene_synonym="H-SP1"
/codon_start=1
/product="synaptophysin-like 1"
/protein_id="AAH61887.1"
/db_xref="GeneID:6856"
/db_xref="HGNC:HGNC:11507"
/translation="MAPNIYLVRQRISRLGQRMSGFQINLNPLKEPLGFIKVLEWIAS
IFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEASFQPPPGVNICDVNW
KDYVLIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDSRKLPMIDFVVTLVA
TFLWLVSTSAWAKALTDIKIATGHNIIDELPPCKKKAVLCYFGSVTSMGSLNVSVIFG
FLNMILWGGNAWFVYKETSLHSPSNTSAPHSQGGIPPPTGI"
BASE COUNT 281 a 197 c 193 g 282 t
ORIGIN
1 cgcggcgcac gcagtatggc gcccaacatc tacttggttc gccagcggat cagtcgactc
61 ggccagagga tgtccggctt ccagatcaac ctcaacccgc tcaaggagcc actcggcttc
121 atcaaggtcc tcgagtggat tgcttctatc tttgcttttg ccacctgtgg aggttttaag
181 ggccaaacag aaattcaagt gaattgtcct cctgcagtta ctgagaataa aactgttaca
241 gctacttttg gttatccatt caggttgaat gaggcatcat ttcagccacc tccaggtgta
301 aacatatgtg atgtaaattg gaaagattac gtcctcatag gcgattactc ttcttctgca
361 caattctatg ttacctttgc agtctttgtg ttcctgtact gcattgctgc ccttctgctt
421 tatgttggct acacgagtct gtatctggat agtcgtaaac ttcctatgat agactttgtt
481 gttacacttg ttgccacttt tttgtggttg gtgagcactt cagcctgggc taaagctctg
541 acagatatta aaatagctac tggtcacaat attattgatg aacttccgcc ttgtaagaag
601 aaagcagtac tgtgttactt tggctctgtg accagtatgg gatccctaaa tgtatctgtg
661 atatttggct ttctaaatat gatactctgg ggaggaaatg cttggtttgt gtacaaggag
721 accagcctac acagtccatc aaatacatct gcccctcata gccaaggagg tattccacct
781 cctaccggaa tataattaaa gggagaaata cactgtatga agtatatgtt gatactatga
841 catgttgcca acaccttgag aagcattatt tgtttctaat aaaagtaatg gctttgtcaa
901 tataaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//