LOCUS BC061698 1610 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nucleoporin 35kDa, mRNA (cDNA clone MGC:62083
IMAGE:4132440), complete cds.
ACCESSION BC061698
VERSION BC061698.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1610)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: b Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56788373.
FEATURES Location/Qualifiers
source 1..1610
/db_xref="H-InvDB:HIT000260230"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:62083 IMAGE:4132440"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1610
/gene="NUP35"
/gene_synonym="MP44"
/gene_synonym="NP44"
/db_xref="GeneID:129401"
/db_xref="HGNC:HGNC:29797"
/db_xref="MIM:608140"
CDS 58..1038
/gene="NUP35"
/gene_synonym="MP44"
/gene_synonym="NP44"
/codon_start=1
/product="nucleoporin 35kDa"
/protein_id="AAH61698.1"
/db_xref="GeneID:129401"
/db_xref="HGNC:HGNC:29797"
/db_xref="MIM:608140"
/translation="MAAFAVEPQGPALGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLP
APVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPG
LGSTPLTSRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIGQPRKTTLSPAQLDPFYT
QGDSLTSEDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSK
LQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQ
PGSTPRISTMRPLATAYKASTSDYQVISDRQTPKKDESLVSKAMEYMFGW"
BASE COUNT 507 a 305 c 321 g 477 t
ORIGIN
1 ggggattttt gaaaattaat tgggaaggta ctggttttaa gtgtagttgc cgacgcaatg
61 gcagcctttg cagtggaacc tcaggggccc gcgttaggat ctgaaccaat gatgctgggt
121 tcacccacat ctccaaagcc aggagttaat gcccagttct tacctggatt tttaatgggg
181 gatttgccag ctccggtgac tccacaacct cgatcaatta gtggcccttc agtaggagta
241 atggaaatga gatcaccttt acttgcaggt gggtcaccac cacaaccagt tgtaccagct
301 cataaagata aaagtggcgc tccaccagtt agaagtatat atgatgacat ttctagccca
361 ggacttggat caacaccttt aacttcaaga agacagccaa acatttcagt aatgcagagt
421 cctcttgttg gagttacatc tactcctgga acagggcaaa gtatgtttag tccagcaagt
481 atcggtcagc cacgaaagac gacattatct cctgcccagt tggatccttt ttatactcaa
541 ggagattctt tgacttcaga agatcacctc gatgactctt gggtgactgt atttgggttt
601 cctcaagcat ctgcttccta catattacta caatttgcac agtatgggaa tatcttaaaa
661 catgtgatgt ctaatacagg aaattggatg catattcgtt atcaatctaa actgcaggct
721 cggaaagcct taagcaaaga tgggaggatt tttggagaat ccatcatgat tggtgtaaaa
781 ccatgtattg acaaaagtgt tatggaaagc agtgacagat gtgctttatc atctccatct
841 ttagccttta caccaccaat caaaactcta ggtacaccaa cacaacctgg aagtactcct
901 aggatttcta ccatgagacc tcttgctaca gcatacaaag cctctactag tgattatcag
961 gttatttctg acagacaaac gccaaaaaaa gatgaaagtc ttgtatccaa agcaatggag
1021 tacatgtttg gctggtagta gaacaccaag aaggaggttg ctacactaaa acagagttag
1081 cagagtgctg ctggttcctt cggttagtta tataactgtt cctgcagtat tggatagcta
1141 tctcatactt cttttagaaa gaagcctttt tcattaagga tacaacctat ttgtagctcg
1201 cactttaaaa gatgcttgag atacatttta aagaaaacta aaaatccctg taaataggat
1261 tttgtgcttt ctgtaacagt gcatgcttca gcacagaaaa ctcagcattg attattgtaa
1321 attaaataac tgaaattgtg gtgagacgtc atagtcttca tgagaacgtg ggggtgaatt
1381 tcatgaaggg gaactatagt tatttctacc gacacaaata ttataattag caatttgaat
1441 tatggtcttt taatttagat agtatttaat attttaatta tccttgtttg tatatgtcct
1501 gtcacagagt gtcctcttgg tgtattctaa aacgagcatt cttttaaaaa acctaaagtt
1561 tcttgataat aaacattgtc aatggaaaaa aaaaaaaaaa aaaaaaaaaa
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