LOCUS BC061564 2405 bp mRNA linear ROD 26-JUL-2016
DEFINITION Rattus norvegicus POU class 1 homeobox 1, mRNA (cDNA clone
IMAGE:6919261), partial cds.
ACCESSION BC061564
VERSION BC061564.1
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: John C. Marshall, M.D., Ph.D
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 52 Row: j Column: 17.
FEATURES Location/Qualifiers
source 1..2405
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="IMAGE:6919261"
/tissue_type="Pituitary gland, anterior, rat"
/clone_lib="NICHD_Rr_Pit1"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..2405
/gene="Pou1f1"
/gene_synonym="GHF1"
/gene_synonym="GHF1A"
/gene_synonym="Pit1"
/gene_synonym="PIT1Z"
/db_xref="GeneID:25517"
/db_xref="RATMAP:41402"
/db_xref="RGD:3367"
CDS <1..1011
/gene="Pou1f1"
/gene_synonym="GHF1"
/gene_synonym="GHF1A"
/gene_synonym="Pit1"
/gene_synonym="PIT1Z"
/codon_start=1
/product="Pou1f1 protein"
/protein_id="AAH61564.1"
/db_xref="GeneID:25517"
/db_xref="RATMAP:41402"
/db_xref="RGD:3367"
/translation="GEKKRTGKRCVLVLYSLVGMSCQPFTSADTFIPLNSDASAALPL
RMHHSAAEGLPASNHATNVMSTVPSILSLIQTPKCLHTYFSMTTMGNTATGLHYSVPS
CHYGNQPSTYGVMAGTLTPCLYKFPDHTLSHGFPPLHQPLLAEDPTASEFKQELRRKS
KLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRF
ENLQLSFKNACKLKAILSKWLEEAEQVGALYNEKVGANERKRKRRTTISIAAKDALER
HFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSLFSISKEHLE
CR"
BASE COUNT 734 a 492 c 498 g 681 t
ORIGIN
1 ggggaaaaaa agcggactgg caagcggtgc gtcttagttc tctactctct tgtgggaatg
61 agttgccaac ctttcacctc ggctgatacc tttatacctc tgaattctga cgcttctgct
121 gccctgcctc tgagaatgca ccacagtgcc gctgagggtc tcccagcctc caaccacgcc
181 accaacgtga tgtccacagt cccgtctatt ttgtctttga tccaaactcc taaatgtttg
241 cacacatatt tctcgatgac aacgatggga aatacagcga caggacttca ttattctgtg
301 ccttcctgtc attatggaaa ccagccatcc acctacggag tgatggcagg cactttaacc
361 ccttgtcttt acaagtttcc agaccacacc ctgagtcatg ggtttcctcc cctgcaccaa
421 cctctgctgg cggaggaccc aacagcctct gaatttaagc aggaactcag gcggaaaagt
481 aaattggtgg aagagccaat agacatggac tccccggaaa tccgagaact ggagcagttt
541 gccaacgaat ttaaagtgag aagaattaag ttaggataca cccagacaaa cgtgggcgaa
601 gctctggccg ctgtccacgg ctccgaattc agtcaaacaa ccatctgccg atttgaaaac
661 ttgcagctca gtttcaaaaa tgcttgcaaa ctgaaagcaa ttttatccaa gtggctggag
721 gaagctgagc aggtcggagc tttgtacaat gaaaaagtgg gagcaaacga aaggaagagg
781 aaacggagga caactatcag tatcgccgct aaggatgctt tggagagaca ctttggagag
841 cacagcaaac cttcttcgca ggagatcatg cggatggctg aagaattgaa tctcgagaaa
901 gaagtagtaa gagtgtggtt ttgcaaccga aggcagagag aaaaacgggt gaaaacgagt
961 ctcaatcaaa gtctgttctc tatttcaaag gagcatcttg agtgcagata agacttgcct
1021 gtggtagcca tgtgtggtag cctttccatt cctttctgat ttcaagaaaa atcagaagtt
1081 acttagcttc ataaactaga ttaaatcagc aacccctgca gtttttgttt cactttcttt
1141 ctttcctttt tagatccaat gatttaaaac aagacgtttt atttagttgt tctcagaatt
1201 catagcattg cctttactcc taaatcatca ccaagaatgc tcacaatacc tcttccaatt
1261 ctgcctttat acctaataca cagagaggtg gggataactg ggagagaggc catcatatat
1321 gcgaatattt tgagtttaaa attacctttt gtaagtcaat ttattgttct ttaaatttta
1381 atcagtaagg acaaatattt accgactatt aaccagggat ggctcaagtt gataatctat
1441 tgacttggcc agagagatgt ctcagtggtt aagagcatct gttgctcttc cagaggatgt
1501 gggttccatc acctatacag ctcacaactg tctgtcacac tatttccaga ggaaatccaa
1561 ggagtctcct gggttccatt gacacttggc ctgaaaatgg agcacagaca tacatgtaga
1621 caacatactc atacatatac agtaaaaata ataaatctat aaacaaaaag aaaatatatt
1681 ggtttatact cagtatgccc ctagcactat gttttgtttt gttttgtttt gttttggagt
1741 aaggtttgac aatccagagg tgactagaga caactaagaa ttttattaat tgccttcaga
1801 aataatcttc agtcagaatc tattgatatc tttgacatta acacttagga cgcgtttttt
1861 gaacaatttg taggagcatt taggcatgac atctgggcgt attcttttat acacattagc
1921 tttctgaggc tctgctacag aaaacatgtg agctgcaagc taaacttgct gacacaataa
1981 tccttcagtt ttggctttgt tttgttttgt ttggtagtga gttcaatcct gagcacaagt
2041 gaaatttaaa aatgaaaaat atggtttagg gatccctaac ctatatcata aatctgtgtg
2101 gaagctgcac tagggcgagg ctacgtggct tacttgctgt tatgtttcca gtgactgaaa
2161 aagcactcgc tcctagtagg tatgtataga ccatgctaaa ggaatgggcc caatggtgaa
2221 caaccgctac aaatatgaag ggtaccaggc aacctgaaaa atctaacttg tttttgaagt
2281 ctcattgtag aaactcacct gaggttcctt aacaaagtgt caattttggt ctcactggtc
2341 acattttgat ttattaataa aaattggaaa tatggcaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaa
//