LOCUS BC061245 1870 bp mRNA linear ROD 11-APR-2007
DEFINITION Mus musculus RIKEN cDNA A230054D04 gene, mRNA (cDNA clone
IMAGE:30246186), partial cds.
ACCESSION BC061245
VERSION BC061245.1
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1870)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1870)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: T. Rajendra Kumar and Martin M. Matzuk
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 53 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1870
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="IMAGE:30246186"
/tissue_type="Pituitary, 120 pooled pituitary glands from
mouse (CD-1 adult females)"
/clone_lib="NIH_MGC_166"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1870
/gene="A230054D04Rik"
/gene_synonym="FAM44A"
/gene_synonym="mKIAA1327"
/db_xref="GeneID:665775"
/db_xref="MGI:MGI:2444804"
CDS <1..1184
/gene="A230054D04Rik"
/gene_synonym="FAM44A"
/gene_synonym="mKIAA1327"
/codon_start=3
/product="A230054D04Rik protein"
/protein_id="AAH61245.1"
/db_xref="GeneID:665775"
/db_xref="MGI:MGI:2444804"
/translation="RRGSTSQEMAKEDKLVANMSGTTSSSSLQRPKKSTETTSIPEQE
PMEIDSEAAVENVSELSKTEDISSNSSQQDTDFENVTKHKATAGVLKDEFRTSMVDSK
PAAAVTCKSGRGLAVTSISERHADHKSTLTKKVHSQGNPSKAAPREREPIQRGAQEVS
VDSEVSRKALSRAPSENEKGQKNLKGMSKTTEECGTHRNASLEYSTDSDLLSSSGSVT
VVPQKESHNSNTIPVIDREAISEGGRASTSLANHSDVPNQYSTVKKSEVHKTNGSKEG
NDGFTVDMPTKANGGSKRHLSEDSQATLLYSKESKISIPLADKSMSVTGDNKNINKQR
SLMGTAKRESDLKVNPDIKQDSAAGEHVVDLSTRKEAETVRRKHQQIAQAQKTTGKAV
P"
BASE COUNT 669 a 365 c 410 g 426 t
ORIGIN
1 accgaagagg aagcacgtca caggaaatgg ccaaggaaga taagttagta gcaaacatgt
61 caggcactac cagtagttcc tctctgcaga gaccaaaaaa aagcacagaa accacatcga
121 tccctgaaca agagccaatg gaaattgatt ctgaggctgc tgttgaaaat gtgtctgaac
181 tttctaaaac tgaggacatc agtagtaaca gttctcagca agacactgac tttgaaaatg
241 ttacaaaaca taaagccact gctggagttt taaaggatga gttcagaact tccatggtag
301 attcaaaacc agcagcagct gtgacatgta aatcagggcg tggactagca gtaacgagca
361 tttctgaaag gcatgctgac cataaaagca ccttgaccaa gaaagtacat agccaaggta
421 acccatcaaa agcagctcct agggaaagag agccaattca gcgaggagcc caggaagtaa
481 gtgtagactc tgaagtgagt cggaaagcac tctctagggc cccatcagaa aacgagaagg
541 ggcagaagaa tttgaaaggc atgtccaaaa ctaccgagga atgtggcact cacagaaatg
601 cttctcttga atactctaca gactcagacc tcttgtcatc ctcaggctct gtgactgttg
661 ttcctcagaa agaatctcac aattctaata caattcctgt aattgacaga gaagccatat
721 cagaaggcgg cagagccagt acctcccttg caaatcattc tgatgtccct aaccaatatt
781 cgactgttaa gaagtcagaa gtacataaaa caaatggcag caaagaaggt aatgatggct
841 tcacagtgga tatgccaaca aaagcaaatg gcggtagcaa aaggcatctt tctgaagata
901 gccaggccac attgctgtac agtaaagaaa gcaaaataag catacctctt gctgacaagt
961 caatgagtgt gactggggac aataagaaca ttaacaaaca aaggagcctg atgggcacag
1021 ccaagagaga gagtgatctg aaagtaaatc ctgatataaa gcaagacagt gctgcaggcg
1081 agcatgtcgt agacctgagt acaagaaagg aggctgagac agtcagacgt aagcatcagc
1141 aaattgcaca ggctcagaag acaacaggga aggctgtgcc ataagttctg aaacagaaga
1201 aagtgcagtc accagcacag gcattactga agaagatggg gaagcatcag cgcaagagag
1261 aagtcagccc tcctggagct cgaacgagag gccagcagaa agtagacgaa aaccctctga
1321 aaaaggcaaa gcggtaatgg tggctctagc tttctgacta acaacccagt ggaaagaaaa
1381 tggacaagcc ttgccccatg gcctttttct ttttttaaaa caagagaagg atctgcatgt
1441 gctgtaagtt cctaggtgca agcttgttca ttttatgttt taaacagctt tacaaaccat
1501 tgttcatgga cggtattatg tacattcact tcagataaag gaagataagt ttactttgta
1561 tcagaactca gcaaagtagt tgtatatttt aacagcagaa attggggttt ccaatgtgac
1621 acatcaagaa tggaatcctt ccagcccatc agacaccagg ctgcccatgg ggatctgtgt
1681 atagtatata aacatgtaaa aacaggctgt attttactca atgtatgatg ctaatcaatg
1741 aacactttat ttattttaca gagaaatctt atctgtgaac tttactatat atctgtttat
1801 tttattttat taattttttt ttaataaaaa gagggtttcc aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa
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