LOCUS BC060886 4045 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens myosin IXA, mRNA (cDNA clone IMAGE:30346841), complete
cds.
ACCESSION BC060886
VERSION BC060886.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4045)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4045)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4045
/db_xref="H-InvDB:HIT000260188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30346841"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4045
/gene="MYO9A"
/gene_synonym="FLJ11061"
/gene_synonym="myosin"
/db_xref="GeneID:4649"
/db_xref="MIM:604875"
CDS 458..2647
/gene="MYO9A"
/gene_synonym="FLJ11061"
/gene_synonym="myosin"
/codon_start=1
/product="MYO9A protein"
/protein_id="AAH60886.1"
/db_xref="GeneID:4649"
/db_xref="MIM:604875"
/translation="MNINDGGRRRFEDNEHTLRIYPGAISEGTIYCPIPAKKNSTAAE
VIESLINKLHLDKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRMALENRLSGED
YRFLLREKNLDGSIHYGSLQSWLRVTEERRRMMERGFLPQPQQKDFDDLCSLPDLNEK
TLLENLRNRFKHEKIYTYVGSILIVINPFKFLPIYNPKYVKMYDNHQLGKLEPHIYAV
ADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAG
PVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVLGAYVEKYLLEKSRLVYQEHNERN
YHVFYYLLAGASEDERSAFHLKQPEEYHYLNQITKKPLRQSWDDYCYDSEPDCFTVEG
EDLRHDFERLQLAMEMVGFLPKTRRQIFSLLSAILHLGNICYKKKTYRDDSIDICNPE
VLPIVSELLEVKEEMLFEALVTRKTVTVGEKLILPYKLAEAVTVRNSMAKSLYSALFD
WIVFRINHALLNSKDLEHNTKTLSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFN
QHIFKLEQEEYRTEGISWHNIDYIDNTCCINLISKKPTGLLHLLDEESNFPQATNQTL
LDKFKHQHEDNSYIEFPAVMEPAFIIKHYAGKVKYGVKDFREKNTDHMRPDIVALLRS
SKNAFISGMIGIDPVAVFRWAILRAFFRAMVAFREAGKRNIHRKTGK"
BASE COUNT 1232 a 755 c 848 g 1210 t
ORIGIN
1 gcgcgaccga agcggataag ggacgcggcg gcggttggct gtgtctgttg agagagtaca
61 ggacagcccg gaccgcgaga ggcggcggcg gaggcagtag ttgcaccggc agcggttgag
121 gcggcggtcc aacgcgtgct ctctgggcgg ggtgcggcgg gggatgtgcc tgctcaggcc
181 gggcggagtc tctctgacag ggcgggggat gcgccgcggc cgctcgcccg gaccctgagg
241 ctgctgggcc caccctcccg gaaccgtccg accctcggtg gcctcggcct cttctgccat
301 ctcaggtcct accctggggc ggagggtgga aggcagcttc cgtcgaagag gagggggctg
361 cggtggccac cgcggcggag cccgagttat tttaccaaga aaatggtttg cacgactttg
421 aacatatact atccatgctg atgggacagg atccaatatg aatataaatg atggaggaag
481 acgacgcttt gaagataatg aacatacatt acggatatat cctggggcta tttcagaagg
541 gacaatctac tgtccgattc ctgccaaaaa aaactccaca gctgctgagg tgattgagtc
601 tcttataaac aaacttcatc ttgacaaaac aaaatgttat gttctagcag aggtaaagga
661 atttggtgga gaagaatgga ttctcaatcc aacagattgt ccagttcagc gaatgatgct
721 gtggccccga atggctctgg aaaatcgctt aagtggagag gactaccgct tccttctgag
781 agagaaaaac cttgatggat caatccatta tggtagcctg cagtcatggc tacgggtaac
841 agaagaacgt cgcaggatga tggaacgggg ttttcttcca cagcctcaac agaaagactt
901 tgatgattta tgtagtttac ctgatttgaa tgagaaaact ctcttagaaa acctacgaaa
961 tcgctttaag catgaaaaaa tttataccta tgttggcagt attctaatag ttattaaccc
1021 attcaagttt cttcctattt ataaccccaa atatgtcaaa atgtatgata accaccaact
1081 gggaaaactt gagccccaca tttatgctgt ggctgatgta gcttatcatg ccatgcttca
1141 gcgcaaaaag aatcagtgca tcgtgatttc aggagagagt ggttctggga agactcaaag
1201 cacaaacttt cttattcacc accttactgc tctcagtcag aaaggatttg ccagtggagt
1261 agaacagatt attcttggag ctggaccagt acttgaggcc tttggaaatg caaagacagc
1321 tcataataac aattcaagtc gttttgggaa gtttattcaa gtaaattacc aggaaacagg
1381 cactgtactt ggtgcctatg ttgaaaaata tctactggag aagtccagac tcgtttatca
1441 ggagcataat gaacggaact atcatgtatt ctattacctc ctggcaggag caagtgaaga
1501 tgagagatca gcattccatc ttaagcaacc agaggaatat cattatctca atcagataac
1561 aaagaaaccc ctcagacaga gctgggatga ttattgctat gactctgagc cggattgctt
1621 cacggtggaa ggagaagatt tgagacatga ctttgagcgc ctacaacttg ccatggaaat
1681 ggtaggattt cttcccaaga cacgaagaca gattttctct cttctctcag ccatactaca
1741 tttgggtaat atctgttaca aaaagaagac ataccgggat gactccattg atatctgtaa
1801 tcctgaagtt ctgcctattg tctcagaatt attagaggtt aaagaagaga tgctatttga
1861 agcattagtt acaaggaaga cggtgacagt gggagaaaag cttattttgc catacaagtt
1921 ggcagaggct gtgacagtga ggaactccat ggctaagtct ctgtatagtg ccctgtttga
1981 ctggatagtt tttcgaatta atcatgcact tctgaatagt aaagatttag agcataatac
2041 caagacattg tctattggtg ttcttgatat ttttgggttt gaagattatg aaaataacag
2101 ctttgaacag ttctgtatta attttgctaa tgaacgttta cagcactact ttaatcagca
2161 tatctttaaa ttggaacaag aggaatatag aactgaaggt atcagctggc acaacataga
2221 ttacattgat aatacctgct gcataaatct tattagcaaa aaaccaacag gactgcttca
2281 tcttttggat gaagaaagca actttccaca ggctacaaat caaacattgc tagacaagtt
2341 taagcatcaa catgaagata attcttacat cgaatttcca gccgtgatgg agcctgcttt
2401 cattataaaa cattatgctg gaaaagtaaa atatggggta aaggatttcc gggaaaaaaa
2461 tacagatcat atgcgcccag acattgtagc tcttctgaga agcagcaaga atgcatttat
2521 ctctgggatg attggaattg atcctgtagc tgttttccga tgggcaattc tccgagcttt
2581 tttcagagcc atggttgctt tcagggaagc tgggaaaaga aacattcaca gaaaaactgg
2641 taagtagtag ttattagtat tctaccatac ttcatctttt tttttttttt tttttacctt
2701 tctacttctc cacaaaaagg agtagaattc ttgctatgag attctcaagg acaaaaatcc
2761 tgcttctgta gtcaatctag tgtcatctct taactgattt gtgactatga acagtttttc
2821 ttttctgtaa aagagttata ctgcctttaa aataatgagg ataaagtcag agcatctgtt
2881 catgaagtgt tcattttctt ttcctttact cttagttcat ggatttttaa aaactttgaa
2941 atttagaaat agataaagca ggatactttt tctgtatgcc tcccccttca atcataaaat
3001 ctctcatctc attttctgtg ggagggcaac ttcataagca cttttggcct actggaaacc
3061 aaactattgt ttgctgtagc tctagtctta gatagggcca ttgctgcata gagaagattt
3121 tgtgatacat atgcagttga gatttatgcc tttcagtaga aatgttatag ggctcacctg
3181 tgctttcagg actcccaaag tgatttacgt ggctttttgg gatgtgcact agtagtaaaa
3241 cttttaagtt tagcttttaa atgtttgaga caaatagata tatttgagag agtgtatttc
3301 taaaaataca tgtaaaataa ttgaacctag tttccatttt ttagattgta aagtatttga
3361 actggtcttt gtagatgtat agggagaatt atagtttatt agagaaataa aaggactatc
3421 tcaaacctgc tttgcctttt acaaagtgat ttctaagagg ttatctttgt aaaaagcttt
3481 aaggaaaatt ttttttcttt aagatgcttt cttgtttatt atgacaaact tctaatcaag
3541 aaaaccactc aaaattgatt agcatcctgc taagacataa ttgagtaaga gaagaaactt
3601 ttcttgtatt tactgtcaaa gcctatttac tttattcaca ttatctgtat attcctttgg
3661 catttaaaat ctattatttg tgaaagctag ttgttacata tctgttatta tcaatatcgg
3721 caatgacatg caatgttatt aatgataaac aacctgtatt ttctctacct tgataaagtc
3781 tagattcctt attttctaat cttgttttcc cttctggcta gtacagagct tccatataat
3841 aatctctttt tgaaaatttg tattcaacat aacatgcata tacaaaagta cacaaagcaa
3901 aaatgtatag ttcagtggag taccacaaag taaacacaac cctggaacta ccacctaggt
3961 taagaaacac aacattccag ccacccaaaa tttctccttg gaaaaaactt taaaattttt
4021 actttttata aaaaaaaaaa aaaaa
//