LOCUS BC060874 3323 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens neurobeachin-like 2, mRNA (cDNA clone IMAGE:30348606),
partial cds.
ACCESSION BC060874
VERSION BC060874.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3323)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3323)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..3323
/db_xref="H-InvDB:HIT000260176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30348606"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3323
/gene="NBEAL2"
/gene_synonym="KIAA0540"
/db_xref="GeneID:23218"
CDS <1..2922
/gene="NBEAL2"
/gene_synonym="KIAA0540"
/codon_start=1
/product="NBEAL2 protein"
/protein_id="AAH60874.2"
/db_xref="GeneID:23218"
/translation="GLRYTAVLKQQATQHSMALLHWGALWRQLASPCGAWALRDTPIP
RWKLSSAETYSRMRLKLVPKHHFDPHLEASALRDNLGEVPLTPTEEASLPLAVTKEAK
VSTPPELLQEDQLGEDELAELETPMEAAELDEQREKLVLSAECQLVTVVAVVPGLLEV
TTQNVYFYDGSTERVETEEGIGYDFRRPLAQLREVHLRRFNLRRSALELFFIDQANYF
LNFPCKVGTTPVSSPSQTPRPQPGPIPPHTQVRNQVYSWLLRLRPPSQGYLSSRSPQE
MLRASGLTQKWVQREISNFEYLMQLNTIAGRTYNDLSQYPVFPWVLQDYVSPTLDLSN
PAVFRDLSKPIGVVNPKHAQLVREKYESFEDPAGTIDKFHYGTHYPNAAGVMHYLIRV
EPFTSLHVQLQSGRFDCSDRQFHSVAAAWQARLESPADVKELIPEFFYFPDFLENQNG
FDLGCLQLTNEKVGDVVLPPWASSPEDFIQQHRQALESEYVSAHLHEWIDLIFGYKQR
GPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTPCQLLKEPHPTRLS
AEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHRQPHSFITQGSP
DLLVTVSASGLLGTHSWLPYDRNISNYFSFSKDPTMGSHKTQRLLSGPWVPGSGVSGQ
ALAVAPDGKLLFSGGHWDGSLRVTALPRGKLLSQLSCHLDVVTCLALDTCGIYLISGS
RDTTCMVWRLLHQGGLSVGLAPKPVQVLYGHGAAVSCVAISTELDMAVSGSEDGTVII
HTVRRGQFVAALRPLGATFPGPIFHLALGSEGQIVVQSSAWERPGAQVTYSLHLYSVN
GKLRASLPLAEQPTALTVTEDFVLLGTAQCALHILQLNTLLPAAPPLPMKVAIRSVAV
TKERSHVLVGLEDGKLIVVVAGQPSEVRSSQFARKLWRSSRRISQVSSGETEYNPTEA
R"
BASE COUNT 643 a 1066 c 991 g 623 t
ORIGIN
1 gggctacgct acacggcagt gctgaagcag caggcaacgc agcactccat ggccctgctg
61 cactgggggg cgctgtggcg ccagctcgcc agcccatgtg gggcctgggc gctgagggac
121 actcccatcc cccgctggaa actgtccagc gccgagacat attcacgcat gcgtctgaag
181 ctggtgccca agcatcactt cgaccctcac ctggaagcca gcgctctccg agacaatctg
241 ggtgaggttc ccctgacacc caccgaggag gcctcactgc ctctggcagt gaccaaagag
301 gccaaagtga gcaccccacc cgagttgttg caggaggacc agctcggcga ggacgagctg
361 gctgagctgg agaccccgat ggaggcagca gaactggatg agcagcgtga gaagctggtg
421 ctgtcggccg agtgccagct ggtgacggta gtggccgtgg tcccagggct gctggaggtc
481 accacacaga atgtatactt ctacgatggc agcactgagc gcgtggaaac cgaggagggc
541 atcggctatg atttccggcg cccactggcc cagctgcgtg aggtccacct gcggcgtttc
601 aacctgcgcc gttcagcact tgagctcttc tttatcgatc aggccaacta cttcctcaac
661 ttcccatgca aggtgggcac gaccccagtc tcatctccta gccagactcc cagaccccag
721 cctggcccca tcccacccca tacccaggta cggaaccagg tgtactcgtg gctcctgcgc
781 ctacggcccc cctctcaagg ctacctaagc agccgctccc cccaggagat gctgcgtgcc
841 tcaggcctta cccagaaatg ggtacagcgt gagatatcca acttcgagta cttgatgcaa
901 ctcaacacca ttgcggggcg gacctacaat gacctgtctc agtaccctgt gttcccctgg
961 gtcctgcagg actacgtgtc cccaaccctg gacctcagca acccagccgt cttccgggac
1021 ctgtctaagc ccatcggtgt ggtgaacccc aagcatgccc agctcgtgag ggagaagtat
1081 gaaagctttg aggacccagc agggaccatt gacaagttcc actatggcac ccactacccc
1141 aatgcagcag gcgtgatgca ctacctcatc cgcgtggagc ccttcacctc cctgcacgtc
1201 cagctgcaaa gtggccgctt tgactgctcc gaccggcagt tccactcggt ggcggcagcc
1261 tggcaggcac gcctggagag ccctgccgat gtgaaggagc tcatcccgga attcttctac
1321 tttcctgact tcctggagaa ccagaacggt tttgacctgg gctgtctcca gctgaccaac
1381 gagaaggtag gcgatgtggt gctacccccg tgggccagct ctcctgagga cttcatccag
1441 cagcaccgcc aggctctgga gtcggagtat gtgtctgcac acctacacga gtggatcgac
1501 ctcatctttg gctacaagca gcgggggcca gccgccgagg aggccctcaa tgtcttctat
1561 tactgcacct atgagggggc tgtagacctg gaccatgtga cagatgagcg ggaacggaag
1621 gctctggagg gcattatcag caactttggg cagactccct gtcagctgct gaaggagcca
1681 catccaactc ggctctcagc tgaggaagca gcccatcgcc ttgcacgcct ggacactaac
1741 tcacctagca tcttccagca cctggacgaa ctcaaggcat tcttcgcaga ggttgtcagt
1801 gatggtgtac ccctggtgct agccctggtc ccccaccggc agccccactc cttcatcacc
1861 cagggttccc cagacctgtt ggtgactgtg agtgccagtg ggctgctggg cacccacagc
1921 tggttgccct atgaccgcaa cataagcaac tacttcagct tcagcaaaga ccccaccatg
1981 ggcagccaca agacgcagcg actgctgagt ggcccgtggg tgccaggcag tggtgtgagt
2041 ggacaagcac tggcagtggc cccggatgga aagctgctat tcagcggtgg ccactgggat
2101 ggcagcctgc gggtgactgc actaccccgt ggcaagctgt tgagccagct cagctgccac
2161 cttgatgtag taacctgcct tgcactggac acctgtggca tctacctcat ctcaggctcc
2221 cgggacacca cgtgcatggt gtggcggctc ctgcatcagg gtggtctgtc agtaggcctg
2281 gcaccaaagc ctgtgcaggt cctgtatggg catggggctg cagtgagctg tgtggccatc
2341 agcactgaac ttgacatggc tgtgtctgga tctgaggatg gaactgtgat catacacact
2401 gtacgccgcg gacagtttgt agcggcacta cggcctctgg gtgccacatt ccctggacct
2461 attttccacc tggcattggg gtccgaaggc cagattgtgg tacagagctc agcgtgggaa
2521 cgtcctgggg cccaggtcac ctactccttg cacctgtatt cagtcaatgg gaagttgcgg
2581 gcttcactgc ccctggcaga gcagcctaca gccctgacgg tgacagagga ctttgtgttg
2641 ctgggcaccg cccagtgcgc cctgcacatc ctccaactaa acacactgct cccggccgcg
2701 cctcccttgc ccatgaaggt ggccatccgc agcgtggccg tgaccaagga gcgcagccac
2761 gtgctggtgg gcctggagga tggcaagctc atcgtggtgg tcgcggggca gccctctgag
2821 gtgcgcagca gccagttcgc gcggaagctg tggcggtcct cgcggcgcat ctcccaggtg
2881 tcctcgggag agacggaata caaccctact gaggcgcgct gaacctggcc agtccggctg
2941 ctcgggcccc gcccccggca ggcctggccc gggaggcccc gcccagaagt cggcgggaac
3001 accccggggt gggcagccca ggggggtgag cggggcccac cctgcccagc tcagggattg
3061 gcgggcgatg ttaccccctc agggattggc gggcggaagt cccgcccctc gccggctgag
3121 gggccgccct gagggccagc actggcgtct gcggccgcag cagcactttt tgcacagtct
3181 ggggcggggt tccccggctt ccaagtcgct gtttcgtcaa agcacgaggg ccgcctgtgg
3241 ccttaattcc taacggcggc cccggttctc ccttctcggc aataaaccag gcctagtttt
3301 gtagccgaaa aaaaaaaaaa aaa
//