LOCUS BC060863 4040 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens zinc finger protein 549, mRNA (cDNA clone MGC:71804 IMAGE:30340439), complete cds. ACCESSION BC060863 VERSION BC060863.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4040) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4040) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: e Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..4040 /db_xref="H-InvDB:HIT000260165" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71804 IMAGE:30340439" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4040 /gene="ZNF549" /gene_synonym="FLJ34917" /db_xref="GeneID:256051" CDS 154..2076 /gene="ZNF549" /gene_synonym="FLJ34917" /codon_start=1 /product="ZNF549 protein" /protein_id="AAH60863.1" /db_xref="GeneID:256051" /translation="MAEAALVNTPQIPMVTEEFVKPSQGHVTFEDIAVYFSQEEWGLL DEAQRCLYHDVMLENFSLMASVGCLHGIEAEEAPSEQTLSAQGVSQARTPKLGPSIPN AHSCEMCILVMKDILYLSEHQGTLPWQKPYTSVASGKWFSFGSNLQQHQNQDSGEKHI RKEESSALLLNSCKIPLSDNLFPCKDVEKDFPTILGLLQHQTTHSRQEYAHRSRETFQ QRRYKCEQVFNEKVHVTEHQRVHTGEKAYKRREYGKSLNSKYLFVEHQRTHNAEKPYV CNICGKSFLHKQTLVGHQQRIHTRERSYVCIECGKSLSSKYSLVEHQRTHNGEKPYVC NVCGKSFRHKQTFVGHQQRIHTGERPYVCMECGKSFIHSYDRIRHQRVHTGEGAYQCS ECGKSFIYKQSLLDHHRIHTGERPYECKECGKAFIHKKRLLEHQRIHTGEKPYVCIIC GKSFIRSSDYMRHQRIHTGERAYECSDCGKAFISKQTLLKHHKIHTRERPYECSECGK GFYLEVKLLQHQRIHTREQLCECNECGKVFSHQKRLLEHQKVHTGEKPCECSECGKCF RHRTSLIQHQKVHSGERPYNCTACEKAFIYKNKLVEHQRIHTGEKPYECGKCGKAFNK RYSLVRHQKVHITEEP" BASE COUNT 1170 a 856 c 940 g 1074 t ORIGIN 1 aactggagcc ggaaaccggt ggaggtggtg tccgcccgca gaggagcttg cctggtctcg 61 gtctgagcgt cgcccagcga tttgccaccg cacgcacgcc ggatcccggg ctttaccgcc 121 cgcctttcca ggccccgccc cgcctaaagt cccatggccg aggcagcgct agtgaatacg 181 ccgcagattc ccatggtaac agaagagttt gtgaaaccat cacagggcca tgtgaccttt 241 gaggatattg ctgtgtactt ctcccaggag gagtggggcc tccttgatga agctcaaagg 301 tgcctgtatc atgatgtgat gctggagaac ttttcgctta tggcctcagt aggttgtttg 361 catggaatag aggctgagga ggccccttct gagcagactc tttctgcgca aggagtgtca 421 caggccagga ctccaaagct aggtccttcc atcccaaatg ctcattcttg tgagatgtgt 481 atcctggtca tgaaagacat tttgtacctc agtgagcatc aggggacact tccctggcag 541 aaaccttata cgtctgtggc cagtgggaaa tggttttcat ttggttctaa cctgcaacag 601 caccagaacc aggacagtgg agagaaacac atcagaaagg aggagagcag tgccttgctt 661 ctgaatagct gcaaaattcc tctgtcagac aatcttttcc catgcaaaga tgttgagaag 721 gattttccaa ccatcctggg ccttctccaa caccagacca cccacagcag acaagagtat 781 gcacatagaa gcagggagac ctttcaacaa agacgttaca aatgtgagca agttttcaat 841 gagaaagttc atgttactga gcatcagaga gtccacactg gagaaaaagc ttataagcgt 901 agggaatatg ggaaatcctt gaactctaaa tacttatttg ttgaacacca gagaacccat 961 aatgcagaaa agccttatgt gtgcaatata tgtgggaaat cattcctcca taaacaaaca 1021 ctcgttgggc accagcagag aattcacact agagaaaggt cttatgtgtg catcgaatgt 1081 gggaaatcct tgagctccaa atactcactt gtggaacacc agagaaccca taatggagaa 1141 aagccttatg tgtgcaatgt atgtgggaaa tcattccgcc acaaacaaac atttgttggc 1201 catcagcaga gaatccacac tggagagagg ccttatgtgt gtatggaatg tgggaaatct 1261 tttattcatt cctatgaccg cattcgacac cagagagttc acactggaga aggggcttat 1321 cagtgcagtg aatgtgggaa atccttcata tacaaacagt cacttcttga tcaccataga 1381 atccacacgg gagaaaggcc ttatgagtgc aaagaatgtg ggaaggcctt cattcacaaa 1441 aaaagacttc ttgagcacca gagaattcat actggagaaa agccttatgt gtgcatcata 1501 tgtgggaaat catttatccg ctcgtctgac tacatgcgac accagagaat tcacactgga 1561 gaaagggctt atgaatgcag tgactgtggg aaagccttca tctccaaaca aacacttctt 1621 aagcatcaca aaatccacac tagagaaagg ccttatgaat gcagtgaatg tggaaaaggc 1681 ttctaccttg aggttaaact tcttcagcac caaagaatcc atactagaga acaactttgt 1741 gagtgcaatg aatgtggaaa agtcttcagc caccaaaaaa gacttcttga gcaccagaaa 1801 gttcacactg gcgaaaagcc ctgtgagtgc agtgaatgtg ggaaatgctt tagacaccgc 1861 accagcctca ttcaacacca gaaagttcac agtggagaga ggccttataa ctgcactgca 1921 tgtgagaagg cctttatcta taaaaacaaa cttgttgagc atcagcgaat ccacaccgga 1981 gaaaagccgt atgaatgtgg taaatgtggg aaagccttca acaaaagata ttcccttgtc 2041 aggcaccaga aggtacatat aacagaagag ccctagcaat tgttgggatg tgtaattgtc 2101 ttattcactg taggacacca gagagctgat ttttcaaggg atccaacaga cagaaattca 2161 ccctcataca tctgcatatc actagttgaa agattcacta caaggtccaa gtacttggga 2221 agctttctag agattacttg tactttctaa tctgcccagt gttacaacag acactaccat 2281 gtggcatatc ctcaccgttt tcatcagtca ctcacatgtg ctcaaggaat gcagaccact 2341 gtgcttacca aattctgaag ggaataatat aataaaagcc tgttgagggt cctcttccat 2401 cttgctgaac tgttcgaggc aaagacaaaa cccaactttg accaagaaga gcaatctgga 2461 ttcttgtagc ccatggaggt ttaccttctt cataggtttt tttttttttt atgtgattgc 2521 catagtggga tattccctct cccacattac ccaagaggga aatgggctgt cttaccatgt 2581 gctgatgtat gtgctctgcc agtgtgaagg gtgaacagct ccaactttat gtccccccag 2641 ggacatagta tgagatcgga aaatagttct tagtcctgtt tgtcttaatt tttattggtt 2701 tccaaggtct cctaggaagg agagcagagc tgtgtggtcc taatcatggt gtcgatgcca 2761 gatttatttg taggtccaga ggtctccctg agaagaggca tttgtgacaa actcaagtgc 2821 tgggacctgc atgaattgtt tatttgcagt gatgcttcat atttcccagc actgttcatg 2881 gtatcttatt tcccaggtcc ttcattgtag ccatgggcac tgaaggactg aattggtagg 2941 taggtcactg gttgtaagac ctactggggc caggtaagaa cagtaattgg cccagacagg 3001 taggtgtgat aaacagagta gaaaagattg tggccaagaa gagtgaatgt gtcccatcca 3061 aaggtgcatc cagatatgtc tgtgttacta tggcttcatg gtttgggggt atatagaaat 3121 tctcaggacc tcagaccttt gattctcctt tagcaacaca catcgtcagc ataaggcatc 3181 taaagatttt gtggactcat aacttatgta ctgtttttga gatgattgct gcacgggcag 3241 gaaagcagga tttgagagaa catacacctt gccttccaga tatgtggttt ttgtgattca 3301 cccagatctg ttgtgccagt taggaattat ctttattact tcccgtttat tgccactgct 3361 gagaaggctg tccttcctaa cttgtgagga gatgaatcct taataataag taaatcttgt 3421 gttatcctat agtctggttt tccaaaagga gaggtagatg catatttttg tgtggaacca 3481 tttatcttaa aacattgagg tgcagttttc atacacaaaa ccttctatct ttttaagaac 3541 tgtctgtatg gtttattgcc cagttaatgg gttttgatag tcatgttatc tcagtaagtg 3601 tcttgtctta gaaatatgtg tgtataggct gggtgcggtg gctcatgcct gtaatcccag 3661 cactttggga ggccaaggca ggtggatcac ctgaggtcag gagtttgaga ccagcctgac 3721 caacatggtg aaatccagtc tctacttaaa atacaaaaat tagccaggcg tggtggcgtg 3781 catttgtaat cccagctaca caggaggctg aggcaggaga attgcttgaa cctggggggc 3841 ggaggttgca atgagccaag gtcgcgccat tgcactccag cctgggcgac agagtgacac 3901 ttctcaaaaa acaaaaacaa aaacaaaaag aacagataag aaatacgtgt gtatatattc 3961 tattttgtgt gttttcattc accttatttc attcagtctt ccaaatgaaa tgttcttaat 4021 tttgaaaaaa aaaaaaaaaa //