LOCUS BC060852 2687 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA
clone MGC:71771 IMAGE:5273703), complete cds.
ACCESSION BC060852
VERSION BC060852.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2687)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2687)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335233.
FEATURES Location/Qualifiers
source 1..2687
/db_xref="H-InvDB:HIT000260154"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71771 IMAGE:5273703"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2687
/gene="CNOT7"
/gene_synonym="hCAF-1"
/db_xref="GeneID:29883"
/db_xref="HGNC:HGNC:14101"
/db_xref="MIM:604913"
CDS 291..1148
/gene="CNOT7"
/gene_synonym="hCAF-1"
/codon_start=1
/product="CCR4-NOT transcription complex, subunit 7"
/protein_id="AAH60852.1"
/db_xref="GeneID:29883"
/db_xref="HGNC:HGNC:14101"
/db_xref="MIM:604913"
/translation="MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFP
GVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFN
LTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGY
DFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL
ERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNA
YEEEANKQS"
BASE COUNT 832 a 496 c 516 g 843 t
ORIGIN
1 gtcaggacgt gcgaaaagcg acggcgcagc acggtgcggc gcagctcctg ctcgcctttc
61 ccttcgctgg gcgagaggtg tctatggggc acccgctgcc gccgccgcta ccgccaccgc
121 caccgccacc gccgccgagt gctgtctcta tggcgaggag gaggaggagg agcgcgagct
181 cagcgacaca aacaggtaca taaataaagg ataaaatatt ttatgaaaca aatcttcaat
241 caagtataac attttgatgc ttggcatcta gactcccttg tgccctcact atgccagcgg
301 caactgtaga tcatagccaa agaatttgtg aagtttgggc ttgcaacttg gatgaagaga
361 tgaagaaaat tcgtcaagtt atccgaaaat ataattacgt tgctatggac accgagtttc
421 caggtgtggt tgcaagaccc attggagaat tcaggagcaa tgctgactat caataccaac
481 tattgcggtg taatgtagac ttgttaaaga taattcagct aggactgaca tttatgaatg
541 agcaaggaga ataccctcca ggaacttcaa cttggcagtt taattttaaa tttaatttga
601 cggaggacat gtatgcccag gactctatag agctactaac aacatctggt atccagttta
661 aaaaacatga ggaggaagga attgaaaccc agtactttgc agaacttctt atgacttctg
721 gagtggtcct ctgtgaaggg gtcaaatggt tgtcatttca tagcggttac gactttggct
781 acttaatcaa aatcctaacc aactctaact tgcctgaaga agaacttgac ttctttgaga
841 tccttcgatt gttttttcct gtcatttatg atgtgaagta cctcatgaag agctgcaaaa
901 atctcaaagg tggattacag gaggtggcag aacagttaga gctggaacgg ataggaccac
961 aacatcaggc aggatctgat tcattgctca caggaatggc ctttttcaaa atgagagaaa
1021 tgttctttga agatcatatt gatgatgcca aatattgtgg tcatttgtat ggccttggtt
1081 ctggttcatc ctatgtacag aatggcacag ggaatgcata tgaagaggaa gccaacaagc
1141 agtcatgaca tgaaatagtc cttttatttt tatttcgagc tacacacatg cttgtatata
1201 ggttttatct ctggttgaat ccctcgaaca atagacagta cctttccccc ccctttcatg
1261 gcccatttta ttgtctgcct ttcagtacta agtatgaccg ttcctatctc agatcttaat
1321 aaaaagaaaa aaaaaaacgc attcaggtta aatttggcct taatttaata tacttgttag
1381 caagcgtgtg tgacagagag tggggaaagc tacatcattg aatattttga taaactttac
1441 cgacttgagt ttggtttatt tttccctttt cctaaattaa ctagcactga ctgtaattta
1501 tttccctgtt tcacgtctct cccttccatt ctgcaggagt tttagctatt tgagatcgtg
1561 gaccatcagt tttgcacttt agagagtgtt tctgactcta aacctgtttt atcagaaaat
1621 ttgttttttc ttgatcttag ctggaaaaat ctgccaactt tacacagtat ttacttggtt
1681 ttgacccaca gaatatagca cgttgtgcaa actgtcgatt cagcgaaact taaaaaagac
1741 aagaaactac tgaggagctt agtaactgct gtttctgtac gtagtgttta atcttccaag
1801 cacatctagt gtctgtcagt ttctaattgg catgtgtagg ctgctctgtg actgaagaat
1861 tttcaaacca gctttacacc cttcaggaaa aatcccttgt gattggatgt ttactatctg
1921 ccaggaaact ggtactcaag atgttgaagc tacagttatt ttatgatagc acacttccct
1981 tgatctgctt atttttattc catcaccatt tacccttttt tttttttaaa ttttgtagcc
2041 attcttatga tgctcttgat ttgttggtta cacaaatcaa ttttattaaa aatccaaaga
2101 taagtcttta ggtatatttt gtaccaaatt aaattagaag acaaaaattg tgctttcata
2161 gttgctacaa aggtaaataa tggagagatt tggtacaaaa caacaaaata tatatatatt
2221 ctcatatata tatatatagc tgataaaatt acctgaggag tgtaatgctt atttttttgt
2281 gtatatcttt gcaatctatt ttatatatat tgacaaaaga gactgtgaaa tacttagcca
2341 tgcagaatat gtgaccagac cagagcatgt gtaggaagac tttacagtaa tcattaactc
2401 taccccgaaa tgatggacta caagttataa tgtgtgttac ctacacttca atcagtaata
2461 ttagcaaatc tccaaatgtt agtcacattg gtttgtctcc cttgtacatt ctttattcat
2521 gatattacag tgctgtaact gggtggtcct ttttaaacaa aacattattt gcaaaacaga
2581 gggtattatt tgtttttaaa gcttttgtaa ataaaggctt caaaatgttt tcttataaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//