LOCUS BC060828 2825 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens AT rich interactive domain 3A (BRIGHT-like), mRNA
(cDNA clone MGC:71697 IMAGE:30342057), complete cds.
ACCESSION BC060828
VERSION BC060828.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885192.
FEATURES Location/Qualifiers
source 1..2825
/db_xref="H-InvDB:HIT000260130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71697 IMAGE:30342057"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2825
/gene="ARID3A"
/gene_synonym="BRIGHT"
/gene_synonym="DRIL3"
/gene_synonym="E2FBP1"
/db_xref="GeneID:1820"
/db_xref="HGNC:HGNC:3031"
/db_xref="MIM:603265"
CDS 291..2072
/gene="ARID3A"
/gene_synonym="BRIGHT"
/gene_synonym="DRIL3"
/gene_synonym="E2FBP1"
/codon_start=1
/product="AT rich interactive domain 3A (BRIGHT-like)"
/protein_id="AAH60828.1"
/db_xref="GeneID:1820"
/db_xref="HGNC:HGNC:3031"
/db_xref="MIM:603265"
/translation="MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPHGRARAAPD
EDREPESARMQRAQMAALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSP
GRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLG
PPGPASLGTTALFPRKAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPP
DHGDWTYEEQFKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLY
VLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMEYLYPYECEKRGLSN
PNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSIT
PAPKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLR
EKLESAEPPEKKMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAV
NLTGTNGSNSISMSVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGSSSSNAGGRGG
NTGTSGGQAGPAGLSTPSTSTSNNSLP"
BASE COUNT 633 a 856 c 862 g 474 t
ORIGIN
1 acgcggacgc ggctggcggc tcggtttctg caaatgcgtg aatgagccgg atgccagcct
61 ctgtcccctg gagcccagcg tgaggaagag gcatgcccca tcagccttca gcttgagccc
121 ggcggccccc gcccccgccc cctgccaccc tgcactgccc cggctccccc gcggccccca
181 cgctgcagtg cggccgggcc ccctccccgc aggggccgcc cccgccgccc acccctagcg
241 cccgtggtgg tggtggtggt ggtggtggtg gtggcccggg ccgcagggcc atgaaactac
301 aggccgtgat ggagacgctg ttgcagcggc agcagcgggc gcgccaggag ctggaggccc
361 ggcagcagct gccccccgat ccccctgctg caccccacgg ccgggcccgg gctgcccccg
421 acgaggacag agagcccgaa agtgcccgga tgcagcgggc tcagatggcc gcactggcag
481 ccatgcgggc tgcagctgcg ggcctgggac acccggccag ccccggcggc tctgaggatg
541 ggcccccagg ctcggaggag gaggacgcgg cccgggaggg gacaccgggc tcacccgggc
601 gaggcagaga agggccagga gaggagcact ttgaggacat ggcctccgac gaggacatga
661 agcccaaatg ggaggaggag gagatggagg aagacctcgg ggaggatgag gaggaggagg
721 aggaggatta cgaggatgag gaggaggagg aggacgagga ggggctgggc cccccaggcc
781 ctgccagctt gggcaccacg gcactgttcc cccgaaaggc ccagccaccc caggccttcc
841 gcggcgatgg cgttcccagg gtgctggggg gccaggagcg gccggggcct ggccctgccc
901 accccggagg ggccgcccac gtagccccgc agctgcagcc gcctgaccac ggcgactgga
961 cttacgagga gcagtttaag cagctctacg aactcgacgg ggaccccaag aggaaggaat
1021 tcctggatga cttgttcagc ttcatgcaga agcgagggac acctgtgaac cgcatcccca
1081 tcatggccaa acaggtcctt gacctgttca tgctgtacgt gctggtgacg gagaagggcg
1141 gcctcgtgga ggtcatcaac aagaagctgt ggcgtgagat caccaagggc ctcaacctgc
1201 ccacgtccat caccagtgca gccttcaccc tgcggaccca atacatggag tacctgtacc
1261 cctacgagtg tgagaagcgg ggcctcagta accccaatga gctccaggca gccatagaca
1321 gcaaccgacg ggagggccgg cgccagagct ttggtggctc cctctttgcc tactcgccag
1381 gcggggcaca cggcatgctc tcctcaccca agctacccgt gtcctccctg ggcctggccg
1441 caagcaccaa cggcagctcc atcacccccg cccctaagat caagaaagag gaggactcag
1501 ccatccccat cacagtccct ggccgcctgc ctgtgtccct ggcgggccac cctgtggtgg
1561 cagcccaggc agcagctgtg caagcagcag ccgcccaagc agctgtggct gcacaggcag
1621 ctgccctgga acagctgcgg gagaagctgg agtctgcgga gcctccggag aagaagatgg
1681 ccctggtggc cgatgagcag caacggctga tgcaacgtgc actccagcag aacttcctgg
1741 ccatggcggc ccagctgccc atgagcattc ggatcaacag ccaagcctcc gaaagccgcc
1801 aggactctgc tgtgaacctg acgggcacca acggcagcaa cagcatcagc atgtcggtgg
1861 agatcaacgg catcatgtac acaggagttc tgtttgctca gccgccggcc cccacgccaa
1921 cctctgctcc caacaaagga ggcggcggcg gcggcagcag cagcagcaac gcaggcggcc
1981 ggggaggaaa caccggaacc agcggcggcc aggctgggcc agcggggctg tccacaccct
2041 ccacatctac ctcaaataac tcgttgcctt aaccgcatca ctccccaccc gccacccacc
2101 ctggagcccg ccggcctggg cagggggtcc aggtgggcca cacaggggcc aggatggcgg
2161 aagatacggg tggggaggga agatatccag aaaggagcca cagctgacgc caaaaagaaa
2221 agaaaaaaga tatatatata tatatatata tatatacacg tatatatata aagagaattt
2281 aataaaacag gggaaaacca aggaacactt gaatttctca ggttttggac attcagagag
2341 atgaattgtg agaacagcaa agaaatccat cagaaaaaca gaaagaggca gacgtttccc
2401 agggcgttca ggcagccctg atggaccgaa ggctctggtg tctggtttgg ccccacagca
2461 gtgtgggccg atcctgttta cctcatacat ccctgcactg tgtgttttca tttttgtctg
2521 ctttagttct cttttatttt ctattcacca cacactcacc actcccagct tctcgtgtcc
2581 agtgaaaccc ctgaaccaag atcactgaat ttttgttttt ttcttgttgc tttgggaaat
2641 ttttttttct ctgtagggtt tttaagaggt ttcgggggtt ttgttgtgta aatattctat
2701 tttattcttg gggggatcaa accttaggaa aaggatatct atatatctat atagctatat
2761 atttgtgttc cttcagggaa actggtcttg aaaaagcaag aaaaaaaagc aaaaaaaaaa
2821 aaaaa
//