LOCUS       BC060827                4221 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens sphingosine-1-phosphate receptor 3, mRNA (cDNA clone
            MGC:71696 IMAGE:30342032), complete cds.
ACCESSION   BC060827
VERSION     BC060827.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4221)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Stefan Hansson
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 133 Row: e Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 38788192.
FEATURES             Location/Qualifiers
     source          1..4221
                     /db_xref="H-InvDB:HIT000260129"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:71696 IMAGE:30342032"
                     /tissue_type="Placenta, normal"
                     /clone_lib="NIH_MGC_147"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..4221
                     /gene="S1PR3"
                     /gene_synonym="EDG-3"
                     /gene_synonym="LPB3"
                     /gene_synonym="S1P3"
                     /db_xref="GeneID:1903"
                     /db_xref="HGNC:HGNC:3167"
                     /db_xref="MIM:601965"
     CDS             397..1533
                     /gene="S1PR3"
                     /gene_synonym="EDG-3"
                     /gene_synonym="LPB3"
                     /gene_synonym="S1P3"
                     /codon_start=1
                     /product="sphingosine-1-phosphate receptor 3"
                     /protein_id="AAH60827.1"
                     /db_xref="GeneID:1903"
                     /db_xref="HGNC:HGNC:3167"
                     /db_xref="MIM:601965"
                     /translation="MATALPPRLQPVRGNETLREHYQYVGKLAGRLKEASEGSTLTTV
                     LFLVICSFIVLENLMVLIAIWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKK
                     TFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGM
                     CWLIAFTLGALPILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILVTIVILYARI
                     YFLVKSSSRKVANHNNSERSMALLRTVVIVVSVFIACWSPLFILFLIDVACRVQACPI
                     LFKAQWFIVLAVLNSAMNPVIYTLASKEMRRAFFRLVCNCLVRGRGARASPIQPALDP
                     SRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMDKNAALQNGIFCN"
BASE COUNT         1081 a         1089 c          995 g         1056 t
ORIGIN      
        1 tagtctctga ctcgctcggg cagaggccga ggaagccggt tccggggacg ggcaacaggg
       61 actcagggac cagaaggcgg ctgcaggacg cgaccgagca ggaccccagg cccgggaacg
      121 acgtcgcgag cgctgagact gccgggcctc ccagcccatc tggcattcga gcgcaggacc
      181 gggcgccccg gcaccgccgc gcgccacccg ctaggatgcc ggtggcccca gcgccctcag
      241 ccgacggagg agcccttttt caacgccctc gctggagtct ggcctgcacg ccttgctgaa
      301 tgaagccgga acctcagccc cgcttccctt tgaaatgaat gttcctgggg cgccctctcg
      361 tggattttgg agctaatcgt ctgtgaatgc caagtgatgg caactgccct cccgccgcgt
      421 ctccagccgg tgcgggggaa cgagaccctg cgggagcatt accagtacgt ggggaagttg
      481 gcgggcaggc tgaaggaggc ctccgagggc agcacgctca ccaccgtgct cttcttggtc
      541 atctgcagct tcatcgtctt ggagaacctg atggttttga ttgccatctg gaaaaacaat
      601 aaatttcaca accgcatgta ctttttcatt ggcaacctgg ctctctgcga cctgctggcc
      661 ggcatcgctt acaaggtcaa cattctgatg tctggcaaga agacgttcag cctgtctccc
      721 acggtctggt tcctcaggga gggcagtatg ttcgtggccc ttggggcgtc cacctgcagc
      781 ttactggcca tcgccatcga gcggcacttg acaatgatca aaatgaggcc ttacgacgcc
      841 aacaagaggc accgcgtctt cctcctgatc gggatgtgct ggctcattgc cttcacgctg
      901 ggcgccctgc ccattctggg ctggaactgc ctgcacaatc tccctgactg ctctaccatc
      961 ctgcccctct actccaagaa gtacattgcc ttctgcatca gcatcttcac ggccatcctg
     1021 gtgaccatcg tgatcctcta cgcacgcatc tacttcctgg tgaagtccag cagccgtaag
     1081 gtggccaacc acaacaactc ggagcggtcc atggcactgc tgcggaccgt ggtgattgtg
     1141 gtgagcgtgt tcatcgcctg ctggtcccca ctcttcatcc tcttcctcat tgatgtggcc
     1201 tgcagggtgc aggcgtgccc catcctcttc aaggctcagt ggttcatcgt gttggctgtg
     1261 ctcaactccg ccatgaaccc ggtcatctac acgctggcca gcaaggagat gcggcgggcc
     1321 ttcttccgtc tggtctgcaa ctgcctggtc aggggacggg gggcccgcgc ctcacccatc
     1381 cagcctgcgc tcgacccaag cagaagtaaa tcaagcagca gcaacaatag cagccactct
     1441 ccgaaggtca aggaagacct gccccacaca gccccctcat cctgcatcat ggacaagaac
     1501 gcagcacttc agaatgggat cttctgcaac tgatcgtctc catgcgccct gctctgcggc
     1561 tgtgttctta tttattgcat gcgtcgcttc cacaggggcc cctcaagagc tgtgactcgg
     1621 gagagctacc ttactttgac caacagcctg cccagtgtgg atgtctctta cagagggggc
     1681 ccaaggaatc accaccccgc ttcagtgtaa acaacgtgcc ttgtccactt tgggctccag
     1741 agtctttcag atgtactaag ctgctgacat catccactgc cttctgctgc atcctagaca
     1801 ccctccctgt tgttcacaga gagggaaggt cgtgggccac acaatgctgt gtgaccctct
     1861 ccgtgtgcct ctgaatggtg ttttgatgat tttacactac atttcctgtg cgtagaatgg
     1921 atgcttgtat attcgtacac ctctatgtta cacagaattt gtgttgcagg tgtttgccat
     1981 gtggtaccta catagaatct ccatacaaca cacaggtaac aggttataca agtggattca
     2041 gactgaaccc ccagtacaag gacattgttt tgaactaggt ggacatgcca tccctggtct
     2101 ccttagactg acatgattct catgttaacc aagttttaaa agttcaaatt ccccaaaaag
     2161 gcttgtccaa ggctggcccc agatgtgtgg gtctgaccca caccagccct gtgtcctgtc
     2221 ctttcagtca tttgtccctg cgtaatttta atcgtattcc aaagcccaat tatgtgatgg
     2281 ttttcaggtt tctgcaaatt acagaagagc cagccaagat cacccaggag cttgtgcccc
     2341 cagatgggcc aaagaaagag cctatgaagg agaagcagaa gcagacggct ggcctggctc
     2401 accttcccac gccagtgggg caggggtctg cttcaggaaa tggaagctgt ccaggaaatg
     2461 agcagagatt cacaagacag cactttgatt ctatgttgag tttgtttcta tattagaaaa
     2521 gcagcaagtc agtaatcccc cgtggcatca cagctaagta gctgtggcca ccggcagttt
     2581 cacagcatcc tgaaagctgg cactgatcgt gactatcagt gaaagaagtt taattttcag
     2641 gttagaaaat gtgatctggc agtttatgca ttcttcagag taatgtaata atacctatgt
     2701 gatgctgtaa ttttactttt caacataagt tgaacccgta gcagtctgtt taccttgtaa
     2761 agggattact tagaagacat ttttgtacat gctcttcccc aaggattgta cgtattatac
     2821 aaatagatgg aaagaaaagt gaacacgttt gtagaacttt cataagcaca cagttgctgt
     2881 gttgagttct ctttaaaaac aaggacaaaa ccaaccagcg ttcaaaggaa cctcccatca
     2941 gagtccccta aagtatttta ggttcagtga gcatttgcct gaataaaacc taaaagagta
     3001 gtcttaacac attactaact ttttctaaga gaaattgatt cctgttttgt catctgatgc
     3061 aatttgctct tataaagaga cattttcata ggttcagagt aactcacctc catgggctga
     3121 ccaaaggctt ttctaatttt tgttactgat gagatgaaac ctatttgtaa ggagatcttc
     3181 cccaggagca tttctgttgc cttcttgaca tcaatgaaaa gtagcatatt ctcttatgaa
     3241 atagcatgag aaaacacagg gcatttctag gacagtaaaa cgttaaagta ctggattaag
     3301 aaaacaacaa caggctgggc gcagtggctc acacctgtaa tcccagcact ttgggaggct
     3361 gaggcgggtg gatcacctga ggtcaggagt ttgtgaccag cctggccaac atagtgaaat
     3421 cctgtttcta ctaaaaatac aaaaattagc tggatgcgat agcacgtgcc tgtagtccca
     3481 gctactcggg aggctgaggc tggagagttg ctcaaacccg ggaggcggag attgcagtga
     3541 gccaagatcg caccgctgca ctccagcctg ggtgacagag cgaccctctg tctcaaaaaa
     3601 taataataat aataaataaa acaacaacaa aatgcatcag agagccaaaa cattcagtat
     3661 tgcattttca cataggtgat gaaatgactt tggaacttta tctgtgttat agttatgagt
     3721 tgctttggga gacttggagc tctctgtagc tattgttcat aacactttgc tccataaccc
     3781 tgatgtccgc agtatctaag tatctcagcc ttcatccatt aactctacta gggagcccac
     3841 agccaccatt tccactagga ggtatcaata tttgtggtat gacataaggc tcccttgaaa
     3901 taacaagact tttgagcaat ctgaattaaa aatacatcaa aaaagtaata gcgctcattt
     3961 gctaaatgca aaaaataatc acctttgata ccaatgtgca ccaatatgcc taactagcta
     4021 gccagctgga gataatttac cagggaatgt ttcaaagccc taaccttgaa gtttggaaac
     4081 aggtggtctt ctatgctgca gagaaactat gcattaggtc tcttttcaat tagaaacctt
     4141 tactatttcc aatgtatgtt tgttaaaaat aataataata aaaccaaaag cctttgtgga
     4201 aacccaaaaa aaaaaaaaaa a
//