LOCUS BC060798 2797 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens transmembrane protein 117, mRNA (cDNA clone MGC:71607
IMAGE:30348706), complete cds.
ACCESSION BC060798
VERSION BC060798.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2797)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2797)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149980.
FEATURES Location/Qualifiers
source 1..2797
/db_xref="H-InvDB:HIT000260100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71607 IMAGE:30348706"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2797
/gene="TMEM117"
/gene_synonym="DKFZp434K2435"
/db_xref="GeneID:84216"
/db_xref="HGNC:HGNC:25308"
CDS 128..1672
/gene="TMEM117"
/gene_synonym="DKFZp434K2435"
/codon_start=1
/product="transmembrane protein 117"
/protein_id="AAH60798.1"
/db_xref="GeneID:84216"
/db_xref="HGNC:HGNC:25308"
/translation="MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANV
IVVGNCFSFVTNKYPRGVGWRILKVLLWLLAILTGLIAGKFLFHQRLFGQLLRLKMFR
EDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYIITDYMGIRNESFMKLAAVGT
WMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRITLFWTVLFTLTSVVVLVIT
TDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHT
PHMQFKIPFFQKIFKEEYRIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYI
GPGQKIYTVKDSESLKDLNRTKLSWEWRSNHTNPRTNKTYVEGDMFLHSRFIGASLDV
KCLAFVPSLIAFVWFGFFIWFFGRFLKNEPRMENQDKTYTRMKRKSPSEHSKDMGITR
ENTQASVEDPLNDPSLVCIRSDFNEIVYKSSHLTSENLSSQLNESTSATEADQDPTTS
KSTPTN"
BASE COUNT 845 a 552 c 570 g 830 t
ORIGIN
1 gtctcgccgc gcttcccagc gaggccgccg gcgcgccgag ggctgtgctc gaccgcgaat
61 cccgtgtgca gtcgccccgc gccccgcgcg acccttcggg taaactacga actgggagtt
121 ctgaagaatg ggtaaagact ttcgttacta tttccagcat ccctggtctc gcatgattgt
181 ggcttacttg gtgatcttct ttaacttctt aatatttgcg gaggacccag tttctcatag
241 ccaaacagaa gccaatgtta ttgttgttgg aaactgtttt tcatttgtta caaataaata
301 ccctagagga gttggctgga ggattttgaa ggtgcttcta tggctacttg ccattctcac
361 aggactaata gctggcaaat ttctgttcca tcagcgtttg tttggtcagt tgctccgatt
421 aaaaatgttt cgagaagatc atgggtcgtg gatgacaatg ttcttcagca caattctctt
481 tctcttcata ttttctcaca tatacaacac gattcttcta atggatggga acatgggagc
541 atatatcatt acagactata tgggcatccg aaatgaaagt ttcatgaaat tagctgcagt
601 agggacctgg atgggggact ttgtcacagc ttggatggtc actgatatga tgcttcagga
661 caaaccctat cctgactggg gaaaatcagc aagagctttc tggaagaaag gaaatgttag
721 gatcacttta ttctggacag ttctttttac tctgacgtct gtggttgtac ttgtgattac
781 aacggactgg atcagctggg acaagctgaa tcggggattt ttgcccagtg atgaagtttc
841 cagagcattc cttgcttctt ttatcttggt ctttgacctt cttattgtga tgcaggactg
901 ggaattccca catttcatgg gagatgttga tgtaaatctc cctggtttgc acacccctca
961 catgcagttc aagattcctt tcttccagaa aatcttcaag gaggaatatc gtattcacat
1021 aacaggcaaa tggtttaact atggaattat cttcctcgtc ttgattttgg atcttaatat
1081 gtggaagaac caaatatttt ataaacctca tgaatatggg caatatatcg gcccggggca
1141 gaagatatat acagtgaaag actcagaaag tttaaaagat ttgaacagaa ccaagctatc
1201 ctgggaatgg aggtccaatc acactaaccc tcggactaat aaaacatatg ttgagggaga
1261 catgttctta cacagcaggt tcataggagc cagtcttgat gtcaagtgtc tggcctttgt
1321 tccaagcctg atagcctttg tgtggtttgg attctttatt tggttctttg gacgattttt
1381 gaaaaatgag ccacgcatgg agaatcaaga caaaacttac actcgcatga aaagaaaatc
1441 tccatcagaa catagcaaag acatgggaat cactcgagaa aacacccagg cttcagtaga
1501 agaccccttg aatgaccctt ctttggtttg catcaggtct gacttcaatg agatcgtcta
1561 caagtcttcc cacctaacct cggaaaactt gagctcacag ttgaacgaat ctactagtgc
1621 aacagaagct gatcaagacc caacgacttc taaaagtaca cctacgaact agactcggag
1681 atagacttgg agataacaca aaaagcaacc ttgagtgtaa ctttaaaaat ttagtctttc
1741 cttttgtata tgtaaggttt acgtagtgtt aggtaaaaat atgaacaatg ccacaacggt
1801 gctcaacatg ctttttctag gattcattgt tttctatttg tattataata cacgtgccta
1861 ctgtatactc aacagtcctc tagagattgc ttttcacaat tgcacaagct attactgact
1921 ttacagcata gtggaagatt agctgatgac ccatgtatct gatgttcaac catagtggtg
1981 ccttgagaca ttaaactgtt tttaactgta ccagaaatga agtgtggaac agttacctaa
2041 cctatttcac atgggcgttt tgtatacaac tattttgatc tacacttgat gtctgagcag
2101 aaaacagaaa tagctaaatg tgactcagga agtatctctt ggtttcttat tcagcagcag
2161 agttggtgac tttgacaact ggactgcaga gaaacatggt gatcaccttt taatttttat
2221 tggctgtctg ccaaatataa atacagatgc aaaattcagt aataggagat ccataaccca
2281 acatgggtca ctactcgtga aatgtgactt tctcccacca gtaattgaaa tgaggtgatg
2341 atacctaatt atgttttcct aattaaagat aaattgctac ttgattaaaa atcctgccct
2401 tcacctttgg gaacaaaggt taagagacac agttgggcga actctcaaat ttattggcat
2461 ttacacaaag tcccagacaa ccaaggaact gaagttttca tcatatgaga gcagcacatc
2521 ccaccattta caatattcgt atatctttct gcaaatatgg ctctggatag tgaaaattga
2581 aaaacatatg ccaaccctga gcaagggaac tcctcaaaaa atcatgcagc ggaaccttgt
2641 caggtagaga agccgtgcat gaaagaattt gtttaatgtc ttgttttgcg tatgtgtttt
2701 ttgtttttgt tttttaagaa ctaaatattg cacattaata aataagaatt atacagcaaa
2761 aaaaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaaa
//