LOCUS BC060797 3141 bp mRNA linear HUM 06-OCT-2006
DEFINITION Homo sapiens par-6 partitioning defective 6 homolog gamma (C.
elegans), mRNA (cDNA clone MGC:71606 IMAGE:30348280), complete cds.
ACCESSION BC060797
VERSION BC060797.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3141)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3141)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254990.
FEATURES Location/Qualifiers
source 1..3141
/db_xref="H-InvDB:HIT000260099"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71606 IMAGE:30348280"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3141
/gene="PARD6G"
/gene_synonym="PAR-6G"
/gene_synonym="PAR6gamma"
/db_xref="GeneID:84552"
/db_xref="HGNC:HGNC:16076"
/db_xref="MIM:608976"
CDS 167..1297
/gene="PARD6G"
/gene_synonym="PAR-6G"
/gene_synonym="PAR6gamma"
/codon_start=1
/product="PARD6G protein"
/protein_id="AAH60797.1"
/db_xref="GeneID:84552"
/db_xref="HGNC:HGNC:16076"
/db_xref="MIM:608976"
/translation="MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFED
FYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAE
RGSLGAGSLCRRRRALGALRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVR
LHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLE
VNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRGGRALGSSGPPSDGTAGF
VGPPAPRVLQNFHPDEAESDEDNDVVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQR
LQRDLALDGGLQRLLSSLRADPRHSLALPPGGVEEHGPAVTL"
BASE COUNT 746 a 791 c 812 g 792 t
ORIGIN
1 gaggcgcgcg gccagcccag ctcgggcccg cagcaccggg agcagcccgc cggccaagcg
61 agcgcgggcc ggggccgggg ccggggcctg ggggcgccgc ccccgggagt ctttctgcgg
121 cccctgagga gcgagggcga cggcgaggct gaccggggcc gaaaccatga accgaagttt
181 tcacaagtct cagaccttgc gattctacga ttgcagcgca gtggaagtca agagcaagtt
241 tggggcggaa ttccgaaggt tctctctgga ccgtcataag cctgggaagt ttgaagattt
301 ctacaagctg gttgtgcaca cccaccatat ctccaacagt gatgtaacta ttggctatgc
361 agatgtgcac ggagacctgc tgcccatcaa caatgatgac aacttctgca aggcggtttc
421 tagtgcaaat cccctgctca gggtcttcat ccagaaacga gaggaggccg agcgtggcag
481 cctcggcgcg ggctcgctgt gcaggcggag gcgggcgctg ggcgcgctgc gtgatgaagg
541 accccggcgg cgtgcacacc tggacatcgg cctcccgcgc gacttccgcc ccgtatcatc
601 catcatcgat gtggacctgg tccccgagac gcaccggcga gtgcggctgc accggcacgg
661 ctgcgagaag ccgctgggct tctacatccg cgatggcgcc agcgtgcgcg tgaccccgca
721 cgggctggag aaggtgcccg gcatcttcat ctcgcgcatg gtacccgggg gcctggcgga
781 gagcaccggg ctgctggctg tgaatgacga ggtcctggag gtgaacggca ttgaggtggc
841 cgggaagacg ctggaccagg tcacggacat gatgatcgcc aacagccaca acctcatcgt
901 caccgtcaag cccgccaacc agcgcaacaa cgtggtgcgc ggcggccgcg cgttgggcag
961 ctcgggaccg ccctcggacg gcaccgcggg cttcgtgggt ccccccgccc cgcgcgtcct
1021 gcagaacttc caccccgacg aggcggagag cgatgaggac aacgacgtcg tcatcgaggg
1081 cacactggag cctgcacgtc ccccccagac cccgggcgcg cccgcaggca gcctctcccg
1141 ggtcaatggc gcgggcctgg cgcagcggct gcagcgggac ctggccctgg acggcggcct
1201 ccagcggctg ctcagctccc tgcgggccga cccccgtcac agcctggcgc tgccgccagg
1261 cggcgtggag gagcacgggc ccgcggtcac gctctagact cccgagaggc ccccaaatcc
1321 tagctccagt tccccggtaa ggacagggac aggacctgca gactgcatcc gctcattttt
1381 tgttgttttt gtgaccacaa aaacaacgct gctctttgtt tcaacttccg gatataaaaa
1441 cacaagtatt gcctattttt atagaatttc gccacagaac ttaaaatgaa cgcctgtaga
1501 gacactctat accaggcctg agtgcaggtc ttggcgcctt tgcaaagtga tagaaaagat
1561 ctgaccaagt gcaaaaaaat gctttttaaa atttttacaa atactttgtt tttaaagtga
1621 agctttaaaa ttactttttt aaaatagtca aattcatgtt tttaagtaag ttggcccatg
1681 caacatgtct cagcattctt gctgtgctct ctgctgactt gcaggcgagg ccgactgtgc
1741 tgatgtacgt gacaagaggc tggtttttaa taacgaatgc agccacagca ccagaccagg
1801 ggctattttt gtgacccaca taggtggccc attcagcctc aaggggaaat ccagggtagg
1861 aggcagcagc tctgctggac tgggctcagc agtcccattt gggatgtaag cctctattgc
1921 ctctaagatg acccttttcc tgtgggttga ctgactctga gggcgatttc ggaaatgttt
1981 tcagcagaaa tgaaggataa gcatcgcaca tgtccagcaa tgtctttgag aatgcagtca
2041 tttgcacgtg agttctcatc tttgttttct gaaacagacg tttcttttag taagtcacaa
2101 tacatgctaa ttttcatttc tagaatggtc actggcagtt ctcactttta actataagaa
2161 gtcacgtgga acttagtgat ttttaacaaa tactaaattc atcctcactt tatgttgatc
2221 ttccagcaac gtttatatat ttagtaattt taaaaattcc tatttgatac aattaaattt
2281 tatataatgt gttttgcttg aataaaatgt tacatttata ctttgagaac tctgaccaaa
2341 tctttcatac agatacaggt aaagaaatat ttttctaggt tgtcggagct gcgtacctcc
2401 cgctgcttct ccttgtggtc cagcaccacc tgctggtcag tggcagaact gtcctgactt
2461 cgtgaacatg gaactgctaa gagggaaaac tgcatctcag cattttcatt ttttctgaat
2521 attaagtgaa aagcaagttc tatttgtaag aaatagcttt tgctgaggag ttgtgaattc
2581 ctgcacctgt gtttgatgtt atttgtatgc aatggattgc tggccctttg ttcctaagca
2641 agagaagacc aaagatgctt ccccatgacc tctccggtga ggatccgcac cccccggact
2701 tgctctctga tgaagggcat gtcgttcagt gccccagcag tcagaagcag tttttgtgga
2761 actaaaacta ataatgttac cctcacaaag gaaatgttct tttactaagt aagttattgc
2821 tgattcttga atgtctgtta tataactggg tcggctatca agaaggaagg ttatatttct
2881 tatcacattt taagttgtta agcaaatgtg agtttttttt taagaaatga ggctttcact
2941 gagatttgtg tgctattcat aattttagga attactgctt agaacagctg cttgggtgta
3001 tttttctaca caggtctgta cttctgccac tttctccttt taaaaaaaca aaactatgca
3061 tattatgtat taaagttttc ttggttttat atatcagaga ataaaaactt ttttgacttt
3121 tgagtaaaaa aaaaaaaaaa a
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