LOCUS BC060781 3148 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens ras homolog gene family, member T1, mRNA (cDNA clone MGC:71555 IMAGE:4823115), complete cds. ACCESSION BC060781 VERSION BC060781.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3148) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3148) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: l Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361737. FEATURES Location/Qualifiers source 1..3148 /db_xref="H-InvDB:HIT000260083" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71555 IMAGE:4823115" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3148 /gene="RHOT1" /gene_synonym="MIRO-1" /db_xref="GeneID:55288" /db_xref="HGNC:HGNC:21168" CDS 240..2096 /gene="RHOT1" /gene_synonym="MIRO-1" /codon_start=1 /product="ras homolog gene family, member T1" /protein_id="AAH60781.2" /db_xref="GeneID:55288" /db_xref="HGNC:HGNC:21168" /translation="MKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPA DVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLIN ERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFY YAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFN TPLAPQALEDVKNVVRKHISDGVADSGFTLKGFLFLHTLFIQRGRHETTWTVLRRFGY DDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKGLFK VFPYIPWGPDVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQ ESQASAVTVTRDKKIDLQKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIR EDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCA RIFKQHFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPS KDIFVKLTTMAMYPHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR" BASE COUNT 952 a 618 c 671 g 907 t ORIGIN 1 gccgccgccg ccgccgccgc cgccgccgcc gccgccgccg ccgccgccac agcccgctgg 61 gccggaggag gcggagctgg cgctgtcccg gctctcttgc ggggaagcaa ctgagggggc 121 ggcgcggcgg gccccggcgg ccgaagaggc tggcaggtgg cgccgtgggg tgggtgctcc 181 tggtgagagg agtccactcc gtgcgtgcgg gcggaggccg gcccccgaga gccgccgaca 241 tgaagaaaga cgtgcggatc ctgctggtgg gagaacctag agttgggaag acatcactga 301 ttatgtctct ggtcagtgaa gaatttccag aagaggttcc tccccgggca gaagaaatca 361 ccattccagc tgatgtcacc ccagagagag ttccaacaca cattgtagat tactcagaag 421 cagaacagag tgatgaacaa cttcatcaag aaatatctca ggctaatgtc atctgtatag 481 tgtatgccgt taacaacaag cattctattg ataaggtaac aagtcgatgg attcctctca 541 taaatgaaag aacagacaaa gacagcaggc tgcctttaat attggttggg aacaaatctg 601 atctggtgga atatagtagt atggagacca tccttcctat tatgaaccag tatacagaaa 661 tagaaacctg tgtggagtgt tcagcgaaaa acctgaagaa catatcagag ctcttttatt 721 acgcacagaa agctgttctt catcctacag ggcccctgta ctgcccagag gagaaggaga 781 tgaaaccagc ttgtataaaa gcccttactc gtatatttaa aatatctgat caagataatg 841 atggtactct caatgatgct gaactcaact tctttcagag gatttgtttc aacactccat 901 tagctcctca agctctggag gatgtcaaga atgtagtcag aaaacatata agtgatggtg 961 tggctgacag tgggtttacc ctgaaaggtt ttctcttttt acacacactt tttatccaga 1021 gagggagaca cgaaactact tggactgtgc ttcgacgatt tggttatgat gatgacctgg 1081 atttgacacc tgaatatttg ttccccctgc tgaaaatacc tcctgattgc actactgaat 1141 taaatcatca tgcatattta tttctccaaa gcacctttga caagcatgat ttggatagag 1201 actgtgcttt gtcacctgat gagcttaaag gtttatttaa agttttccct tacatacctt 1261 gggggccaga tgtgaataac acagtttgta ccaatgaaag aggctggata acctaccagg 1321 gattcctttc ccagtggacg ctcacgactt atttagatgt acagcggtgc ctggaatatt 1381 tgggctatct aggctattca atattgactg agcaagagtc tcaagcttca gctgttacag 1441 tgacaagaga taaaaagata gacctgcaga aaaaacaaac tcaaagaaat gtgttcagat 1501 gtaatgtaat tggagtgaaa aactgtggga aaagtggagt tcttcaggct cttcttggaa 1561 gaaacttaat gaggcagaag aaaattcgtg aagatcataa atcctactat gcgattaaca 1621 ctgtttatgt atatggacaa gagaaatact tgttgttgca tgatatctca gaatcggaat 1681 ttctaactga agctgaaatc atttgtgatg ttgtatgcct ggtatatgat gtcagcaatc 1741 ccaaatcctt tgaatactgt gccaggattt ttaagcaaca ctttatggac agcagaatac 1801 cttgcttaat cgtagctgca aagtcagacc tgcatgaagt taaacaagaa tacagtattt 1861 cacctactga tttctgcagg aaacacaaaa tgcctccacc acaagccttc acttgcaata 1921 ctgctgatgc ccccagtaag gatatctttg ttaaattgac aacaatggcc atgtatccgc 1981 acgtgacaca agctgacctc aagagctcca cgttttggct tcgagcaagt tttggtgcta 2041 ctgtttttgc agttttgggc tttgctatgt acaaagcatt attgaaacag cgatgatata 2101 aaaagaaata ctgtccctac caaaaacaaa tacttttatg tacattctga atgctttaag 2161 ttctgctaga attattgaga tatttataca tgcagagtta ctttattaat atttgtaatt 2221 catgcataag agtattttaa tgatagttat aactgcagta ttggctagca tatggaaaga 2281 aaacagctaa cagccaaact aaaatggcta aattccagag gccaaaaggg aatattttgt 2341 aaatatatgt acatattcag gcaagatatg gtctcccaag ctgagttcta gaaatgatgt 2401 ttctagacat ttctaagtgg tattgttagt gctcacttgg ctcactcttc taggtttaag 2461 ttagcccaga gattgtattt actcatggat cactttattt atttcacatt tactcagaat 2521 gatcctttgg gttctataag gacataaggt acaatttgcc attgtctctc catttttaaa 2581 aacatacaag tcagtgtcag cttaccaaca tgacattttt tcagtcagtt gtggtaggcc 2641 agccttgaag ccatcgcaca gtctagaaac ttgtgtagct gagtgtgcag ctcaccttta 2701 agggtgaagt taggtaaaag caattagcag aggcgttatc tatgtgatta tgttgcttcc 2761 ttgtcagtat gttgaatttt atagcccttt caatgaaata aaaaaaaaat ttgtatatta 2821 ccaatgtttt tagtttaaat aaagagtcac ccttactact gttgaatttc atcccaagtg 2881 taaatcattc tataatggct gtgtctgtta tagtatatta cagtaactgc atgtgtcacc 2941 aagtgttcta tatcaggcta ggataaccta gaggcagtaa ttttttaaat gataaaataa 3001 atctaatgaa tataaactct catgataaac ctattttttc catcatcagc cttttcaagt 3061 atttaaataa ataactgctg tgtactgtga tcttgagttc ttttgtcatc taaagtaaat 3121 atttctgtac agaaaaaaaa aaaaaaaa //