LOCUS BC060770 2769 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens sushi domain containing 1, mRNA (cDNA clone MGC:71518
IMAGE:30348765), complete cds.
ACCESSION BC060770
VERSION BC060770.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48093064.
FEATURES Location/Qualifiers
source 1..2769
/db_xref="H-InvDB:HIT000260072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71518 IMAGE:30348765"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2769
/gene="SUSD1"
/gene_synonym="RP11-4O1.1"
/db_xref="GeneID:64420"
CDS 33..2306
/gene="SUSD1"
/gene_synonym="RP11-4O1.1"
/codon_start=1
/product="SUSD1 protein"
/protein_id="AAH60770.2"
/db_xref="GeneID:64420"
/translation="MGRGPWDAGPSRRLLPLLLLLGLARGAAGAPGPDGLDVCATCHE
HATCQQREGKKICICNYGFVGNGRTQCVDKNECQFGATLVCGNHTSCHNTPGGFYCIC
LEGYRATNNNKTFIPNDGTFCTDIDECEVSGLCRHGGRCVNTHGSFECYCMDGYLPRN
GPEPFHPTTDATSCTEIDCGTPPEVPDGYIIGNYTSSLGSQVRYACREGFFSVPEDTV
SSCTGLGTWESPKLHCQEINCGNPPEMRHAILVGNHSSRLGGVARYVCQEGFESPGGK
ITSVCTEKGTWRESTLTCTEILTKINDVSLFNDTCVRWQINSRRINPKISYVISIKGQ
RLDPMESVREETVNLTTDSRTPEVCLALYPGTNYTVNISTAPPRRSMPAVIGFQTAEV
DLLEDDGSFNISIFNETCLKLNRRSRKVGSEHMYQFTVLGQRWYLANFSHATSFNFTT
REQVPVVCLDLYPTTDYTVNVTLLRSPKRHSVQITIATPPAVKQTISNISGFNETCLR
WRSIKTADMEEMYLFQIWGQRWYQKEFAQEMTFNISSSSRDPEVCLDLRPGTNYNVSL
RALSSELPVVISLTTQITEPPLPEVEFFTVHRGPLPRLRLRKAKEKNGPISSYQVLVL
PLALQSTFSCDSEGASSFFSNASDADGYVAAELLAKDVPDDAMEIPIGDRLYYGEYYN
APLKRGSDYCIILRITSEWNKVRRHSCAVWAQVKEIPCNCNFLRLHIHRANSGDTQIR
HSCCCRWRVLDWVPWLL"
BASE COUNT 734 a 664 c 709 g 662 t
ORIGIN
1 gcgcgggcgc gccgggaggg accggcggcg gcatgggccg ggggccctgg gatgcgggcc
61 cgtctcgccg cctgctgccg ctgttgctgc tgctcggcct ggcccgcggc gccgcgggag
121 cgccgggccc cgacggttta gacgtctgtg ccacttgcca tgaacatgcc acatgccagc
181 aaagagaagg gaagaagatc tgtatttgca actatggatt tgtagggaac gggaggactc
241 agtgtgttga taaaaatgag tgccagtttg gagccactct tgtctgtggg aaccacacat
301 cttgccacaa cacccccggg ggcttctatt gcatttgcct ggaaggatat cgagccacaa
361 acaacaacaa gacattcatt cccaacgatg gcaccttttg tacagacata gatgagtgtg
421 aagtttctgg cctgtgcagg catggagggc gatgcgtgaa cactcatggg agctttgaat
481 gctactgtat ggatggatac ttgccaagga atggacctga acctttccac ccgaccaccg
541 atgccacatc atgcacagaa atagactgtg gtacccctcc tgaggttcca gatggctata
601 tcataggaaa ttatacgtct agtctgggca gccaggttcg ttatgcttgc agagaaggat
661 tcttcagtgt tccagaagat acagtttcaa gctgcacagg cctgggcaca tgggagtccc
721 caaaattaca ttgccaagag atcaactgtg gcaaccctcc agaaatgcgg cacgccatct
781 tggtaggaaa tcacagctcc aggctgggcg gtgtggctcg ctatgtctgt caagagggct
841 ttgagagccc tggaggaaag atcacttctg tttgcacaga gaaaggcacc tggcgagaaa
901 gtactttaac atgcacagaa attctgacaa agattaatga tgtatcactg tttaatgata
961 cctgtgtgag atggcaaata aactcaagaa gaataaaccc caagatctca tatgtgatat
1021 ccataaaagg acaacggttg gaccctatgg aatcagttcg tgaggagaca gtcaacttga
1081 ccacagacag caggacccca gaagtgtgcc tagccctgta cccaggcacc aactacaccg
1141 tgaacatctc cacagcacct cccaggcgct cgatgccagc cgtcatcggt ttccagacag
1201 ctgaagttga tctcttagaa gatgatggaa gtttcaatat ttcaatattt aatgaaactt
1261 gtttgaaatt gaacaggcgt tctaggaaag ttggatcaga acacatgtac caatttaccg
1321 ttctgggtca gaggtggtat ctggctaact tttctcatgc aacatcgttt aacttcacaa
1381 cgagggaaca agtgcctgta gtgtgtttgg atctgtaccc tacgactgat tatacggtga
1441 atgtgaccct gctgagatct cctaagcggc actcagtgca aataacaata gcaactcccc
1501 cagcagtaaa acagaccatc agtaacattt caggatttaa tgaaacctgc ttgagatgga
1561 gaagcatcaa gacagctgat atggaggaga tgtatttatt ccaaatttgg ggccagagat
1621 ggtatcagaa ggaatttgcc caggaaatga cctttaatat cagtagcagc agccgagatc
1681 ccgaggtgtg cttggaccta cgtccgggta ccaactacaa tgtcagtctc cgggctctgt
1741 cttcggaact tcctgtggtc atctccctga caacccagat aacagagcct cccctcccgg
1801 aagtagaatt ttttacggtg cacagaggac ctctaccacg cctcagactg aggaaagcca
1861 aggagaaaaa tggaccaatc agttcatatc aggtgttagt gcttcccctg gccctccaaa
1921 gcacattttc ttgtgattct gaaggcgctt cctccttctt tagcaacgcc tctgatgctg
1981 atggatacgt ggctgcagaa ctactggcca aagatgttcc agatgatgcc atggagatac
2041 ctataggaga caggctgtac tatggggaat attataatgc acccttgaaa agagggagtg
2101 attactgcat tatattacga atcacaagtg aatggaataa ggtgagaaga cactcctgtg
2161 cagtttgggc tcaggtgaaa gaaatacctt gtaactgtaa tttcctgagg ctgcatatcc
2221 acagggccaa ctcaggggac acacagattc gtcactcatg ctgctgcaga tggcgggtgt
2281 tggactgggt tccctggctg ttgtgatcat tctcacattc ctctccttct cagcggtgtg
2341 atggcagatg gacactgagt ggggaggatg cactgctgct gggcaggtgt tctggcagct
2401 tctcaggtgc ccgcacagag gctccgtgtg acttccgtcc agggagcatg tgggcctgca
2461 actttctcca ttcccagctg ggccccattc ctggatttaa gatggtggct atccctgagg
2521 agtcaccata aggagaaaac tcaggaattc tgagtcttcc ctgctacagg accagttctg
2581 tgcaatgaac ttgagactcc tgatgtacac tgtgatattg accgaaggct acatacagat
2641 ctgtgaatct tggctgggac ttcctctgag tgatgcctga gggtcagctc ctctagacat
2701 tgactgcaag agaatctctg caacctccta tataaaagca tttctgttaa tccaaaaaaa
2761 aaaaaaaaa
//