LOCUS BC060668 6812 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HLA-B associated transcript 2, mRNA (cDNA clone
MGC:57530 IMAGE:6471026), complete cds.
ACCESSION BC060668
VERSION BC060668.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18375627.
FEATURES Location/Qualifiers
source 1..6812
/db_xref="H-InvDB:HIT000260059_05"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57530 IMAGE:6471026"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..6812
/gene="BAT2"
/gene_synonym="D6S51"
/gene_synonym="D6S51E"
/gene_synonym="G2"
/db_xref="GeneID:7916"
/db_xref="HGNC:HGNC:13918"
/db_xref="MIM:142580"
CDS 174..6647
/gene="BAT2"
/gene_synonym="D6S51"
/gene_synonym="D6S51E"
/gene_synonym="G2"
/codon_start=1
/product="HLA-B associated transcript 2"
/protein_id="AAH60668.1"
/db_xref="GeneID:7916"
/db_xref="HGNC:HGNC:13918"
/db_xref="MIM:142580"
/translation="MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGL
QSLGKVAIARRMPPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDAST
AQPPESQPLPASQTPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASS
LLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDEL
EGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTP
DGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVD
YTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAW
AETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWR
QRRKQSSSEISLAVERARRRREEEERCMQEERRAACAEKLKRLDEKFGAPDKRLKAEP
AAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPEKEPEEPAQAPPAQSTPTPGVAAA
PTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIG
PTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPP
QPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPP
LDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTA
TPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPL
EEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPP
PPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQG
DETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGE
YFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGRTASETR
SEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPP
SPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPLPP
SKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQ
ERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEE
WETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAK
DLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSP
KNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPG
GHPRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAG
VSPFPPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHI
WNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQ
RSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQ
PLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKE
LTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAG
PSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGVALKGQ
FLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYS
TPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPAL
QPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSS
RTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPP
REGPSRRAEEPGSRGDKEPGLPPPR"
BASE COUNT 1450 a 2284 c 1928 g 1150 t
ORIGIN
1 cgggaggagc cgaacccggc gccatccgcc gccatcctcc cccgccccac cgccatcccg
61 tcccggggag cccctaggcc cgggtcccgg atccccgcgc acccggccag gctctggcac
121 gttttggggg aggtgcctgc aggacccaac atactcaatg agcttccagc gcaatgtccg
181 atcgctcggg gccgactgcc aagggaaagg atggaaagaa gtattcctcg ctcaacctgt
241 ttgatacgta taagggcaag tccttagaga tccagaaacc cgctgttgcc cctcgccatg
301 gcctgcagag tctcgggaaa gttgccattg cccggcgtat gccacctcca gccaaccttc
361 caagcctgaa agccgagaac aaaggcaatg accccaatgt ctcactagtg ccaaaagacg
421 gaacaggatg ggcaagcaaa caggagcagt ccgaccccaa gagttccgat gcctcaaccg
481 ctcagccgcc ggaatcgcag ccactgccgg cttcacagac gcctgcctcc aaccagccga
541 aacgaccccc agcagccccc gagaacactc ctttggttcc aagcggggta aagtcctggg
601 cacaagccag cgtcacccat ggagcacatg gagatggtgg aagggcatca agcctactgt
661 cacgattctc tcgagaggaa tttccgaccc tgcaggcggc tggcgaccag gacaaggctg
721 ccaaggaaag ggagtctgcc gaacagtcgt ctgggcccgg accaagcctc cgcccccaaa
781 attctacaac ttggagggac ggaggtgggc gtggccctga tgagctggag ggcccggact
841 ccaaacttca tcatggtcat gatccccggg gtgggctaca gccttcaggc ccaccccagt
901 tccctcccta ccgcggaatg atgccgcctt tcatgtatcc cccatatctc ccgttccctc
961 cgccctatgg accccagggg ccttaccgat accccactcc tgatgggccc agccgttttc
1021 cccgtgtggc gggcccccga ggctcagggc caccaatgcg cttagtagag cctgtgggtc
1081 gtccctctat tctcaaagag gataatctca aagagtttga tcagttggat caggagaatg
1141 atgatggttg ggcaggggcc catgaagagg ttgactacac tgaaaagctc aagttcagcg
1201 atgaggaaga tgggcgagac tctgatgagg agggagctga gggccacagg gattcccaat
1261 cagcttctgg tgaggaacgg ccccctgaag cagatggcaa aaagggcaac tcccccaaca
1321 gcgaaccgcc cactcctaag acggcctggg cagaaacctc tcggcctcca gagacagagc
1381 cgggacctcc tgccccaaag cctcccctac ccccacctca ccggggcccc gccgggaact
1441 ggggcccccc tggggactac ccagatcgtg ggggtcctcc ctgcaagccc ccagcacctg
1501 aagatgagga tgaggcatgg cggcagcgac gaaagcagtc gtcatctgag atttccctgg
1561 cagtggagcg ggcccggcga cggcgagaag aagaggagcg gtgcatgcaa gaagagcgcc
1621 gggcagcctg tgctgagaag ctcaagcgac tcgatgaaaa gtttggggca cctgacaagc
1681 ggctcaaagc agagcctgct gccccacctg ctgccccttc taccccagct ccaccacctg
1741 cagtccctaa agaactccct gcacctccag ctccacctcc agcatcagcc ccaacaccag
1801 agaaagaacc tgaagagcca gcacaggccc ctcctgccca atctactcct actccaggtg
1861 tggctgcggc tcccactctg gtgagtggtg gtggcagtac cagtagcacc agcagtggca
1921 gcttcgaagc cagcccagtg gaaccacaac tgccctcaaa agagggtcct gaaccaccag
1981 aagaggttcc tcctcctacc acacccccag ttccaaaggt ggaacccaag ggtgatggga
2041 ttggtcccac ccgccagccc cctagtcagg gcttgggcta ccccaaatat cagaagtcgt
2101 tgcctcctcg tttccagcgg cagcagcagg agcagctcct gaagcagcag cagcagcacc
2161 agtggcagca gcatcaacag ggctctgccc ctcctacccc agtgccccca tcaccaccac
2221 agcctgtgac cctgggggct gtgccagctc cacaggctcc acccccgccc cccaaggccc
2281 tgtacccagg tgctctgggc cggcccccac ccatgccccc aatgaacttt gatccccgat
2341 ggatgatgat tcctccttat gtggaccccc ggctcctcca gggtcgtccc cctctagact
2401 tctaccctcc tggtgtgcat ccctctggcc tagttccccg agagcgttca gacagtgggg
2461 gctcaagctc agagccattt gaccgtcatg cacctgctat gttacgggaa cggggcactc
2521 caccggtgga tccaaagttg gcctgggtag gagatgtctt caccgccaca cccgctgaac
2581 cccgcccact tacctcacct ctgcgccagg ctgcggatga ggatgacaag gggatgagga
2641 gcgagactcc tccagtacct cccccaccac cctatctggc cagttatcca ggctttcctg
2701 agaatggagc ccctgggccc ccaatctctc gctttcctct ggaggaacca gggccccgtc
2761 cactcccctg gcccccaggc agtgatgaag tggccaagat acaaactcca ccacccaaga
2821 aggagccccc taaggaggag actgcacagc tgacggggcc agaagcaggc cgaaagcctg
2881 cccgcggagt cgggagtgga ggccagggcc ccccaccacc acgcagagag agtcgcacag
2941 agacccgctg gggccctcgt ccagggagca gtcgtcgtgg aatccctcca gaggagccag
3001 gggccccacc ccgccgggct gggcctataa agaaacctcc accacctaca aaagtagaag
3061 agctgcctcc caagcccctc gaacaggggg atgaaacccc caaaccccca aagccagacc
3121 cactcaagat aaccaagggg aagctagggg gccccaagga gaccccaccc aatggaaatc
3181 tttcccctgc cccaaggctt cggagggact attcgtatga aagagtgggt cctacctctt
3241 gccggggtcg gggccgaggc gagtattttg ccagagggag gggttttcgg gggacctatg
3301 ggggacgagg gcggggagcc cgaagccggg aattccgcag ttaccgagag tttcgaggag
3361 atgatgggcg tggaggtggg acagggggac caaaccaccc tcctgctccc cgaggccgca
3421 ctgccagcga gacacggagc gagggttcag agtatgagga aatccccaag cggcgccggc
3481 agcggggctc agaaacaggc agcgagaccc atgagagtga tctggctcct tcagacaagg
3541 aggctcccac acccaaggag ggaacactca cccaggtccc tctcgctccc ccaccaccag
3601 gagccccacc ttcaccagcc ccagcccgct tcactgcccg gggtgggcga gtcttcactc
3661 ccagaggggt gccatctcgc cggggccgag gaggagggag gccccctcct caagtttgcc
3721 caggctggag ccctccagcc aagtctctgg ctcccaagaa acctcccaca ggccctttgc
3781 caccaagtaa ggagcctttg aaagagaagt tgatcccagg gcctctgtcc cctgtggcgc
3841 gcggaggcag caatggaggt agcaatgtgg gcatggaaga tggggagcga ccccgaagga
3901 ggcgacatgg gagggctcag cagcaggata aaccgcctcg tttccggagg ctgaagcagg
3961 aacgggagaa tgccgcaagg gggtctgagg gcaagccctc cctaaccctt ccagcctccg
4021 ctcctggacc tgaggaggcc ctcacaacag tcacagtggc cccagcacct cgccgggcag
4081 ctgccaagtc tcctgatctg tcaaaccaga actcagacca agccaatgag gaatgggaga
4141 ctgcatcaga gagcagtgac ttcaccagtg agcgccgagg ggacaaagag gcacccccac
4201 cagtactgct gacacccaag gctgtgggaa ctcctggggg aggtggaggt ggagccgtac
4261 caggtatttc agccatgtcc cgcggagatc tgagccagag agccaaggat ttgagtaaac
4321 ggagcttctc aagtcagcgg ccaggcatgg aacggcagaa tcggcgccct ggcccagggg
4381 gcaaggctgg cagcagtggc agcagcagtg gaggaggcgg tgggggtcct ggaggaagga
4441 ccgggccagg acgaggcgac aagaggagct ggccctctcc caagaaccga agtcgtcctc
4501 cagaggagcg tcccccgggg cttcccctgc ctcccccacc tcccagcagt tctgctgtct
4561 tccgcctgga ccaagttatc cacagcaacc ctgctggcat ccaacaggct ctggcccagc
4621 ttagtagccg tcaagggagt gtaactgcac cagggggtca tccaaggcac aagcctgggc
4681 ctccccaagc ccctcagggc ccctctccta ggcccccaac ccgatacgag ccccagaggg
4741 tcaacagcgg cctcagttct gacccccact ttgaggagcc ggggccaatg gtgagagggg
4801 tgggtgggac tcctcgggac tctgccgggg ttagtccctt tccccctaaa cgtcgggagc
4861 ggcctcccag aaaaccagag ctgctacagg aggaatcttt gccacctcct catagctctg
4921 gattcttggg ctctaagcct gagggcccag gccctcaggc agagtccaga gatacaggca
4981 cagaggccct gacccctcac atctggaacc gtttacatac tgccactagc cgaaagagtt
5041 accggcccag ctccatggag ccttggatgg agcccctgag tccttttgag gatgtggctg
5101 gcacagaaat gagtcagtct gacagtgggg tggacctgag tggggattct caggtgtcat
5161 caggtccctg cagccagcga agttcccctg atggaggact caagggggca gcagagggac
5221 cccccaagag gcctggaggc tcctcacccc tgaatgctgt tccttgtgag ggtccacctg
5281 gctctgaacc tcctaggaga ccaccacctg ccccccacga tggggacaga aaggagctgc
5341 cccgggagca gcctctgccc cctggcccca ttggcacaga acgatcacag cgtacagacc
5401 gaggcacaga gcctggcccc attcggccat cccatcgacc tggtccccca gtccagtttg
5461 gcactagtga caaggactca gacttacgcc tagtggtagg agacagcttg aaagcagaga
5521 aggagctaac agcatcagtc actgaggcca ttcctgtatc acgagactgg gagctgcttc
5581 ccagtgctgc tgcctctgct gagccacaat ccaagaacct ggattctggg cactgtgtcc
5641 cggagcccag ctcctcaggc cagcgcctgt atcctgaggt tttctatggc agtgctgggc
5701 cttccagttc tcagatctct gggggagcca tggactctca attacatcca aacagtggag
5761 gcttccgccc tgggacaccc tcactgcacc cttacagatc acagccccta tacctacccc
5821 cgggcccagc ccctccctca gcactgctct ctggggtagc tctcaagggc cagtttctgg
5881 atttctccac aatgcaagct acagagctgg ggaagttgcc ggctggagga gttctctacc
5941 ctccaccttc cttcctctac tctccggctt tctgccccag tcctttgcct gacacatcgt
6001 tgcttcaggt acgccaggat ctgccatccc cttcggattt ttattctact cctctgcagc
6061 ctggtggcca aagtggcttt ctcccttcag gggctcctgc ccagcagatg cttctaccca
6121 tggtagactc acagctgcct gtggtgaact ttggctccct gccgccagca ccacctcctg
6181 ccccacctcc cctttctctg ttacctgtgg gccctgctct gcagcccccc agcctggctg
6241 tgcggccccc acctgctcct gctactcggg tgctgccttc acctgccagg cccttccccg
6301 ctagcttggg gcgagcagag ctgcatccag tggaactaaa gccgttccag gattatcaaa
6361 aactgagcag caaccttggg ggacctggat catcacggac tcccccaact ggaaggtcct
6421 tctctggcct caattcccgt ctcaaggcca cgccttccac ctacagtgga gtcttccgca
6481 cccagcgcgt cgacctttac cagcaggcct ccccaccaga tgccctgcgc tggataccta
6541 agccttggga gcggacaggg ccgccacctc gagaagggcc ctcccgacgg gcagaggagc
6601 ctgggtcccg aggggacaag gagcctgggt tgcccccacc ccgctgaggg agttcctctt
6661 gccccctacc cccggggctt gtatatagat tataaatata taagggggaa aggggtgggc
6721 ggggaggggt tgtggggctg gggcctcact tcccctcctc ccccttcccc tggtcccctg
6781 tccctggggc tgtttgttaa aaaaaaaaaa aa
//