LOCUS BC059944 477 bp mRNA linear HUM 06-JAN-2006 DEFINITION Homo sapiens LSM domain containing 1, mRNA (cDNA clone MGC:74837 IMAGE:5223785), complete cds. ACCESSION BC059944 VERSION BC059944.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 477) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 477) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-OCT-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 135 Row: j Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254987. FEATURES Location/Qualifiers source 1..477 /db_xref="H-InvDB:HIT000260021" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74837 IMAGE:5223785" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..477 /gene="LSMD1" /gene_synonym="MGC14151" /gene_synonym="PFAAP2" /db_xref="GeneID:84316" /db_xref="HGNC:HGNC:28212" /db_xref="IMGT/GENE-DB:28212" /db_xref="MIM:28212" CDS 29..406 /gene="LSMD1" /gene_synonym="MGC14151" /gene_synonym="PFAAP2" /codon_start=1 /product="LSMD1 protein" /protein_id="AAH59944.1" /db_xref="GeneID:84316" /db_xref="HGNC:HGNC:28212" /db_xref="IMGT/GENE-DB:28212" /db_xref="MIM:28212" /translation="MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEREDSAAERARQQ LEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVLGLA MVPGHHIVSIEVQRESLTGPPYL" BASE COUNT 116 a 131 c 144 g 86 t ORIGIN 1 gaaaggccca gaggaggcct ccgggcaaat ggccggagct ggaccgacca tgctgctacg 61 agaagagaat ggctgttgca gtcggcgtca gagcagctcc agtgccgggg attcggacgg 121 agagcgcgag gactcggcgg ctgagcgcgc ccgacagcag ctagaggcgc tgctcaacaa 181 gactatgcgc attcgcatga cagatggacg gacactggtc ggctgctttc tctgcactga 241 ccgtgactgc aatgtcatcc tgggctcggc gcaggagttc ctcaagccgt cggattcctt 301 ctctgccggg gagccccgtg tgctgggcct ggccatggta cccggacacc acatcgtttc 361 cattgaggtg cagagggaga gtctgaccgg gcctccgtat ctctgaccac gatggcgctt 421 acctttcaga cttcattaaa cttatgaccg aaaaaaaaaa aaaaaaaaaa aaaaaaa //