LOCUS BC059404 3595 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens B-cell CLL/lymphoma 6, member B (zinc finger protein),
mRNA (cDNA clone MGC:71775 IMAGE:30342006), complete cds.
ACCESSION BC059404
VERSION BC059404.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3595)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3595)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327514.
FEATURES Location/Qualifiers
source 1..3595
/db_xref="H-InvDB:HIT000260003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71775 IMAGE:30342006"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3595
/gene="BCL6B"
/gene_synonym="BAZF"
/gene_synonym="ZBTB28"
/db_xref="GeneID:255877"
/db_xref="HGNC:HGNC:1002"
/db_xref="MIM:608992"
CDS 64..1506
/gene="BCL6B"
/gene_synonym="BAZF"
/gene_synonym="ZBTB28"
/codon_start=1
/product="B-cell CLL/lymphoma 6, member B (zinc finger
protein)"
/protein_id="AAH59404.1"
/db_xref="GeneID:255877"
/db_xref="HGNC:HGNC:1002"
/db_xref="MIM:608992"
/translation="MGSPAAPEGALGYVREFTRHSSDVLGNLNELRLRGILTDVTLLV
GGQPLRAHKAVLIACSGFFYSIFRGRAGVGVDVLSLPGGPEARGFAPLLDFMYTSRLR
LSPATAPAVLAAATYLQMEHVVQACHRFIQASYEPLGISLRPLEAEPPTPPTAPPPGS
PRRSEGHPDPPTESRSCSQGPPSPASPDPKACNWKKYKYIVLNSQASQAGSLVGERSS
GQPCPQARLPSGDEASSSSSSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPY
LLTSQAQDTSGSPSERARPLPGSEFFSCQNSEAVAGCSSGLDSLVPGDEDKPYKCQLC
RSSFRYKGNLASHRTVHTGEKPYHCSICGARFNRPANLKTHSRIHSGEKPYKCETCGS
RFVQVAHLRAHVLIHTGEKPYPCPTCGTRFRHLQTLKSHVRIHTGEKPYHCDPCGLHF
RHKSQLRLHLRQKHGAATNTKVHYHILGGP"
BASE COUNT 796 a 956 c 961 g 882 t
ORIGIN
1 ggagaccccg ccccccttaa gaagagaagc cgcggcccct gcaggacggg ggcctgtgtc
61 gctatgggtt cccccgccgc cccggaggga gcgctgggct acgtccgcga gttcactcgc
121 cactcctccg acgtgctggg caacctcaac gagctgcgcc tgcgcgggat cctcactgac
181 gtcacgctgc tggttggcgg gcaacccctc agagcacaca aggcagttct catcgcctgc
241 agtggcttct tctattcaat tttccggggc cgtgcgggag tcggggtgga cgtgctctct
301 ctgcccgggg gtcccgaagc gagaggcttc gcccctctat tggacttcat gtacacttcg
361 cgcctgcgcc tctctccagc cactgcacca gcagtcctag cggccgccac ctatttgcag
421 atggagcacg tggtccaggc atgccaccgc ttcatccagg ccagctatga acctctgggc
481 atctccctgc gccccctgga agcagaaccc ccaacacccc caacggcccc tccaccaggt
541 agtcccaggc gctccgaagg acacccagac ccacctactg aatctcgaag ctgcagtcaa
601 ggccccccca gtccagccag ccctgacccc aaggcctgca actggaaaaa gtacaagtac
661 atcgtgctaa actctcaggc ctcccaagca gggagcctgg tcggggagag aagttctggt
721 caaccttgcc cccaagccag gctccccagt ggagacgagg cctccagcag cagcagcagc
781 agcagcagca gcagcagtga agaaggaccc attcctggtc cccagagcag gctctctcca
841 actgctgcca ctgtgcagtt caaatgtggg gctccagcca gtacccccta cctcctcaca
901 tcccaggctc aagacacctc tggatcaccc tctgaacggg ctcgtccact accgggaagt
961 gaatttttca gctgccagaa ctctgaggct gtggcagggt gctcatcggg gctggactcc
1021 ttggttcctg gggacgaaga caaaccctat aagtgtcagc tgtgccggtc ttcgttccgc
1081 tacaagggca accttgccag tcaccgtaca gtgcacacag gggaaaagcc ttaccactgc
1141 tcaatctgcg gagcccgttt taaccggcca gcaaacctga aaacgcacag ccgcatccat
1201 tcgggagaga agccgtataa gtgtgagacg tgcggctcgc gctttgtaca ggtggcacat
1261 ctgcgggcgc acgtgctgat ccacaccggg gagaagccct acccttgccc tacctgcgga
1321 acccgcttcc gccacctgca gaccctcaag agccacgttc gcatccacac cggagagaag
1381 ccttaccact gcgacccctg tggcctgcat ttccggcaca agagtcaact gcggctgcat
1441 ctgcgccaga aacacggagc tgctaccaac accaaagtgc actaccacat tctcgggggg
1501 ccctagctga gcgcaggccc aggccccact tgcttcctgc gggtgggaaa gctgcaggcc
1561 caggccttgc ttccctatca ggcttgggca taggggtgtg ccaggccact ttggtatcag
1621 aaattgccac cctcttaatt tctcactggg gagagcaggg gtggcagatc ctggctagat
1681 ctgcctctgt tttgctggtc aaaacctctt ccccacaagc cagattgttt ctgaggagag
1741 agagctaggg gctgggaaag gggagagatt ggagtcctgg tctccctaag ggaatagccc
1801 tccacctgtg gcccccattg cattcagttt atctgtaaat ataatttatt gaggcctttg
1861 ggtggcaccg gggccttcat tcgattgcat ttcccactcc cctcttccac aagtgtgatt
1921 aaaagtgacc agaaacacag aaggtgagat cacagctctg ctggcagaga ttactagccc
1981 ttggctctct cgtttggctt gggtatttta tattatttct gtcataactt ttatctttag
2041 aattgttctt tctcctgttt gtttgcttgt tagtttgttt aaaatggaaa aaggggttct
2101 ctgtgttctg cccctgtaat tctaggtctg gaacctttat ttgttctagg gcagctctgg
2161 gaacatgcgg gattgtggaa ttgggtcagg aaccctctct ggtattctgg atgttgtagg
2221 ttctctagca gtctagaaat ggatacagac atttctctgt tcttcaaggg tgataggaac
2281 cattatgttg agcccaaaat ggaagtaata ataaatgcct cctggaggct gtgggtgtgg
2341 gggattctgt atctggattc cgtatcactc caactggagg ctgtgggtgt gggggattct
2401 gtatctggat tccgtatcac tccaagtgga ggctggcagg tttttctgca agatggtcca
2461 gaatctaaaa tgtcccatta atctggtcac ttgggtttgg ctctgctgta tccatctata
2521 gtggtagaga cccaccaggg ctcaagtgga gtccatcatc ctcccacggg ggcctgttct
2581 tagcactgag ttgatcgctc catgggggag agatcagaca ttccttatca gagatgatgt
2641 gaccttttct gactctgccc agtctctatg aatgttatgg cctagggaag aatcatgaaa
2701 ctctttagct tgattagatg gtaaacagtg ttaacccatc ctttactaca gaggcatatg
2761 ggtttgaatg ttacctgggg ttctctctat tgagttgagc cccttcttcc tttagtgggt
2821 tttggacatc ttctggcaag tgtccagatg ccagaacctt cttttcctct agaagggatg
2881 gtgcttggta accttacctt ttaaaagctg ggtctgtgac ctggtcttcc catccctgca
2941 ttcctgtctg gaaccagtga atgcattaga accttccata ggaaaagaaa aggggctgag
3001 ttccattctg ggtttgctgt agtttggttg ggattattgt tggcattaca gatgtaaaag
3061 attgactagc ccataggcca aaggcctgtt ctagttgacc aagtttcaag taggattaag
3121 aggttggttg aggggtgcag tttctggtgt aggccaggta ggtagaaagt gaggaacagg
3181 gttgcctctt ggctgggtgg agtctctgaa atgttagaag aagcgctgaa gccttgattg
3241 atagttctgc cccttgttgc cctggggctt atctgattat gggacgaggg tagaaagtaa
3301 gaagcacttt tgaatttgtg gggtagaact tcaacaataa gtcagttcta gtggctgtcg
3361 cctggggact agtgagaaag ctactcttct ccctcttccc tctttctccc catggcccca
3421 ctgcagaatt aaagaaggaa gaagggaagg cggaggagtc tataagaagg aatcatgatt
3481 tctatttagc agattggatg ggcaggtgga gaatgcctgg gggtagaaat gttagatctt
3541 gcaacatcag atccttggaa taaagaagcc tctctgtgca aaaaaaaaaa aaaaa
//