LOCUS BC059401 2342 bp mRNA linear HUM 12-APR-2007
DEFINITION Homo sapiens family with sequence similarity 108, member C1, mRNA
(cDNA clone MGC:71761 IMAGE:30346383), complete cds.
ACCESSION BC059401
VERSION BC059401.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2342)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2342)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..2342
/db_xref="H-InvDB:HIT000260000"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71761 IMAGE:30346383"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2342
/gene="FAM108C1"
/db_xref="GeneID:58489"
/db_xref="HGNC:HGNC:26925"
CDS 90..1079
/gene="FAM108C1"
/codon_start=1
/product="FAM108C1 protein"
/protein_id="AAH59401.2"
/db_xref="GeneID:58489"
/db_xref="HGNC:HGNC:26925"
/translation="MPEPGPRMNGFSLGELCWLFCCPPCPSRIAAKLAFLPPEPTYTV
LAPEQRGAGASAPAPAQATAAAAAAQPAPQQPEEGAGAGPGACSLHLSERADWQYSQR
ELDAVEVFFSRTARDNRLGCMFVRCAPSSRYTLLFSHGNAVDLGQMCSFYIGLGSRIN
CNIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTV
DLASRYECAAVILHSPLMSGLRVAFPDTRKTYCFDAFPSIDKISKVTSPVLVIHGTED
EVIDFSHGLAMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFISHELPNS"
BASE COUNT 545 a 590 c 561 g 646 t
ORIGIN
1 agctccctcg ccgcgcgtcc gtcctccgtc ctcccgggcc agccagccag ccagccagcc
61 gggccggcgg cgggcaccag gccgtcccga tgcccgagcc aggccccagg atgaacggct
121 tctcgctggg cgagctgtgc tggctcttct gctgcccgcc ctgcccgagc cgcatcgccg
181 ccaagctggc cttcctgccg cccgagccca cctacacggt gctggcgccg gagcagcgcg
241 gcgccggcgc gtccgccccg gccccggccc aggctaccgc cgccgccgcc gcggcccagc
301 cggcaccgca gcagcccgag gagggcgcgg gcgcggggcc cggtgcgtgc agcctgcacc
361 tcagcgagcg cgccgactgg cagtactcgc agcgcgagct ggacgccgtc gaggtcttct
421 tctcgcgcac ggcccgggac aaccggctcg gctgcatgtt cgtgcgctgc gcgccctcca
481 gccgctacac gctgctcttc tcgcacggca acgccgtgga cctgggccag atgtgcagct
541 tctacattgg cctcggctcc cgcatcaact gcaacatctt ctcctacgac tactcgggat
601 acggcgtcag ctcgggcaag ccctccgaga agaacctcta cgccgacatc gacgccgcgt
661 ggcaggcgct gcgcacccgg tatggcgtga gtcccgagaa cattatcctc tatggtcaga
721 gcattgggac tgtccccacg gtagacttgg cctcgaggta tgaatgcgca gcggtaattc
781 tccattcccc tctgatgtct ggtttgcgtg tggcttttcc ggataccagg aaaacatact
841 gctttgatgc tttccccagc attgacaaga tatctaaagt cacctctcct gtgttggtca
901 ttcatggtac agaggatgag gtcatcgatt tctcccatgg cctagcgatg tacgagcgct
961 gtccccgagc cgtggagccc ctttgggttg aaggggctgg gcataatgac atagagcttt
1021 atgcacaata cctagaaaga ctaaaacagt tcatatctca cgaacttcct aattcctgaa
1081 gacaacaact tgatcttacc tcatttactg tgaacagaag agtcctctgt tttgcacatg
1141 ctttaactgg gtagctgtaa aggcttgata accatgaaga agtgcccaac ctttagggtg
1201 ttctaatcaa agagctgatg aaatctcagt cttttgtatc tagaggtggt tctgctaatt
1261 cacacaacac gttaaactga acagtcgtga ttcccagctt cattaccttg caggaatggg
1321 aatgagagct gaatgtaggg acaattttct agtgctgtat aaagtagcct cgcatctgtt
1381 tctcaacctt atccatcatt tctgacattc atgcaggact tgccctgttg ccaccaatgt
1441 tctcggtatt tcacatgcag ctctctttct gccactggat acatgggttc aatccatttg
1501 tgaagctgtg atagtgtaac tggaaagcta gtgtggtgaa aattccttta ttattttttg
1561 ttaacatgct gatctttccc ggacaaatga actgaagggt aatttactgg aactctcgtg
1621 tacagcttca tcaactgtaa ccatataaat ataactggaa tattcttaaa caaaaagaaa
1681 ctaggggttt ttttaagtgt aaatttatta ctagccaaca gagttttact attttgattg
1741 tctggttggt ttaacaaaga gcctagctga ctttccttct gtaaagtcct ccttgtaggc
1801 ttttttaaag tactgtacat atttgcaatc acattgtgca tagattctta atggtagata
1861 tgatttcttt tgtcaggcta caacaatgaa ctgcagattc cttgtttgta atgtaaatga
1921 ttgaatacat tttgttaata tgtttttatt cctatgtttt gctattaaaa attttataac
1981 atttccaaga caaaaattcc aagtttatgc tttgaagaat ttatgtaatt aaaatttcac
2041 taaactaatc tttttagttt aggaattatt tgggttttga cactggaagt tgcgccaaat
2101 aagcatcaga aataggagat gcttaacatt gctatactac ttgtgttggt taggggtttg
2161 gatttggggg ttctttggtt ttaatttttt ttccacattt aaaagcctta aatgtactgt
2221 aagcctcaga tcgttgtaca actggactgc ggttgattgc cagtttgtgt actgttgctt
2281 ggatgcggca cagtggttgg taatggaata aaggatgcat ggatcagaaa aaaaaaaaaa
2341 aa
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