LOCUS BC059399 3562 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 27 (fatty acid transporter),
member 1, mRNA (cDNA clone MGC:71751 IMAGE:30341529), complete cds.
ACCESSION BC059399
VERSION BC059399.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3562)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38524615.
FEATURES Location/Qualifiers
source 1..3562
/db_xref="H-InvDB:HIT000259998"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71751 IMAGE:30341529"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3562
/gene="SLC27A1"
/gene_synonym="ACSVL5"
/gene_synonym="FATP"
/gene_synonym="FATP1"
/gene_synonym="FLJ00336"
/gene_synonym="MGC71751"
/db_xref="GeneID:376497"
/db_xref="HGNC:HGNC:10995"
/db_xref="MIM:600691"
CDS 51..1991
/gene="SLC27A1"
/gene_synonym="ACSVL5"
/gene_synonym="FATP"
/gene_synonym="FATP1"
/gene_synonym="FLJ00336"
/gene_synonym="MGC71751"
/codon_start=1
/product="solute carrier family 27 (fatty acid
transporter), member 1"
/protein_id="AAH59399.1"
/db_xref="GeneID:376497"
/db_xref="HGNC:HGNC:10995"
/db_xref="MIM:600691"
/translation="MRAPGAGAASVVSLALLWLLGLPWTWSAAAALGVYVGSGGWRFL
RIVCKTARRDLFGLSVLIRVRLELRRHQRAGHTIPRIFQAVVQRQPERLALVDAGTGE
CWTFAQLDAYSNAVANLFRQLGFAPGDVVAIFLEGRPEFVGLWLGLAKAGMEAALLNV
NLRREPLAFCLGTSGAKALIFGGEMVAAVAEVSGHLGKSLIKFCSGDLGPEGILPDTH
LLDPLLKEASTAPLAQIPSKGMDDRLFYIYTSGTTGLPKAAIVVHSRYYRMAAFGHHA
YRMQAADVLYDCLPLYHSAGNIIGVGQCLIYGLTVVLRKKFSASRFWDDCIKYNCTVV
QYIGEICRYLLKQPVREAERRHRVRLAVGNGLRPAIWEEFTERFGVRQIGEFYGATEC
NCSIANMDGKVGSCGFNSRILPHVYPIRLVKVNEDTMELLRDAQGLCIPCQAGEPGLL
VGQINQQDPLRRFDGYVSESATSKKIAHSVFSKGDSAYLSGDVLVMDELGYMYFRDRS
GDTFRWRGENVSTTEVEGVLSRLLGQTDVAVYGVAVPGVEGKAGMAAVADPHSLLDPN
AIYQELQKVLAPYARPIFLRLLPQVDTTGTFKIQKTRLQREGFDPRQTSDRLFFLDLK
QGHYLPLNEAVYTRICSGAFAL"
BASE COUNT 583 a 1159 c 1076 g 744 t
ORIGIN
1 ggggcggggc tggagcggcc cgcggcctca gctctctctg cttccccagg atgcgggctc
61 cgggtgcggg cgcggcctcg gtggtctcgc tggcgctgtt gtggctgctg gggctgccgt
121 ggacctggag cgcggcagcg gcgctcggcg tgtacgtggg cagcggcggc tggcgcttcc
181 tgcgcatcgt ctgcaagacc gcgaggcgag acctcttcgg tctctctgtg ctgatccgcg
241 tgcgcctgga gctgcggcgg caccagcgtg ccggccacac catcccgcgc atctttcagg
301 cggtagtgca gcgacagccc gagcgcctgg cgctggtgga tgccgggacc ggcgagtgct
361 ggacctttgc gcagctggac gcctactcca atgcggtagc caacctcttc cgccagctgg
421 gcttcgcgcc gggcgacgtg gtggccatct tcctggaggg ccggccggag ttcgtggggc
481 tgtggctggg cctggccaag gcgggcatgg aggccgcgct gctcaacgtg aacctgcggc
541 gcgagcccct ggccttctgc ctgggcacct cgggcgctaa ggccctgatc tttggaggag
601 aaatggtggc ggcggtggcc gaagtgagcg ggcatctggg gaaaagtttg atcaagttct
661 gctctggaga cttggggccc gagggcatct tgccggacac ccacctcctg gacccgctgc
721 tgaaggaggc ctctactgcc cccttggcac agatccccag caagggcatg gacgatcgtc
781 ttttctacat ctacacgtcg gggaccaccg ggctgcccaa ggctgccatt gtcgtgcaca
841 gcaggtacta ccgcatggca gccttcggcc accacgccta ccgcatgcag gcggctgacg
901 tgctctatga ctgcctgccc ctgtaccact cggcaggaaa catcatcggc gtggggcagt
961 gtctcatcta tgggctgaca gtcgtcctcc gcaagaaatt ctcggccagc cgcttctggg
1021 acgactgcat caagtacaac tgcacggtgg ttcagtacat cggggagatc tgccgctacc
1081 tgctgaagca gccggtgcgc gaggcggaga ggcgacaccg cgtgcgcctg gcggtgggga
1141 acgggctgcg tcctgccatc tgggaggagt tcacggagcg cttcggcgta cgccaaatcg
1201 gggagttcta cggcgccacc gagtgcaact gcagcattgc caacatggac ggcaaggtcg
1261 gctcctgtgg tttcaacagc cgcatcctgc cccacgtgta ccccatccgg ctggtgaagg
1321 tcaatgagga cacaatggag ctgctgcggg atgcccaggg cctctgcatc ccctgccagg
1381 ccggggagcc tggcctcctt gtgggtcaga tcaaccaaca ggacccgctg cgccgcttcg
1441 atggctatgt cagcgagagc gccaccagca agaagatcgc ccacagcgtc ttcagcaagg
1501 gcgacagcgc ctacctctca ggtgacgtgc tagtgatgga tgagctgggc tacatgtact
1561 tccgggaccg tagcggggac accttccgct ggcgagggga gaacgtctcc accaccgagg
1621 tggagggcgt gctgagccgc ctgctgggcc agacagacgt ggccgtctat ggggtggctg
1681 ttccaggagt ggagggtaag gcagggatgg cggccgtcgc agacccccac agcctgctgg
1741 accccaacgc gatataccag gagctgcaga aggtgctggc accctatgcc cggcccatct
1801 tcctgcgcct cctgccccag gtggacacca caggcacctt caagatccag aagacgaggc
1861 tgcagcgaga gggctttgac ccacgccaga cctcagaccg gctcttcttc ctggacctga
1921 agcagggcca ctacctgccc ttaaatgagg cagtctacac tcgcatctgc tcgggcgcct
1981 tcgccctctg aagctgttcc tctactggcc acaaactctg ggcctggtgg gagaggccag
2041 cttgagccag acagcgctgc ccaggggtgg ccgcctagta cacacccacc tggccgagct
2101 gtacctggca cggcccatcc tggactgaga aactggaacc tcagaggaac ccgtgcctct
2161 ctgctgcctt ggtgcccctg tgtctgcctc ctctccctgc ttttcagcct ctgtctcctt
2221 ccatccctgt ccctgtctgg ccttaactct tccctctttt tcttttcttt ctttctttct
2281 ttttttttta agatagagtc tcactctgct gcccgggcta gagtgcagtg gtgggatctc
2341 ggctcactgc aacctctgcc tcctggggtt caagtgatcc tcccacctca gcctcctgag
2401 tagctgggat tacaggcacc cgccaccacg tccagctaat ttttatattt ttagtagaga
2461 cggggtttca ccatgttggt caggctggtc ttgaactcct gacctcaggt gatccgctgg
2521 cctcggcctc ccagagtgct gggattatag gcgtgagcct ctggcccggc ctttcctttt
2581 tcctctcctc tcctgccgag agtggaacac acgtgtcctg ggagctgcat cttgtgtagg
2641 gtccagctgc ttttggggac tgcaggaatc atctcccctg ggccctggac tcggactggg
2701 gcctccccac ctccctctcg gctgtgcctt acggagcccc aatccaggcc tcctgtggct
2761 gttgggttcc agatgctgca gctccatgtg acttccaagc aggccctccg ccctccctgc
2821 tgaatggagg agccgggggt cccccaggcc aactggaaaa tctcccaggc taggccaatt
2881 gccttttgca cttccccgtt cctgtcacat ttccccagcc ccaccttccc ctcctgatgc
2941 cctgaaagct tccggaattg actgtgacca cttggatgtc accactgtca gcccctgcct
3001 tgatgtcccc atttagccat ctccatggag ctcctgctgg agggccctga accctgcact
3061 gcgtggctgc ccagccagct gcctcctgtc ctgggaggag gcctcctggg tgtcctcatc
3121 tggtgtgtct actggagggt cccacaggag aggcagcaga ggggtcaggg gaggtctcct
3181 gccgggggtt ggcctctcaa gcctcagggg ttctagcctg ttgaatatac cccacctggt
3241 ggtggcccct ccgatgtccc cactgatggc tctgacaccg tgttggtggc gatgtcccag
3301 acaatcccac caggacggcc cagacatccc tactggcttc gctggtggct catctcgaac
3361 atccacgcca gcctttctgg ggccggccac ccaggccgcc tgtccgtctg tcctccctcc
3421 agcagcaccc cctggcccct ggagtggtgg ggccatggca agagacaccg tggcgtctca
3481 tgtgaacttt cctgggcact gtggttttat ttcctaattg atttaagaaa taaacctgaa
3541 gaccgtcaaa aaaaaaaaaa aa
//