LOCUS BC059356 2684 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger, X-linked, duplicated A, mRNA (cDNA clone
MGC:71491 IMAGE:30347480), complete cds.
ACCESSION BC059356
VERSION BC059356.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550088.
FEATURES Location/Qualifiers
source 1..2684
/db_xref="H-InvDB:HIT000259956"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71491 IMAGE:30347480"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2684
/gene="ZXDA"
/db_xref="GeneID:7789"
/db_xref="HGNC:HGNC:13198"
/db_xref="MIM:300235"
CDS 12..2411
/gene="ZXDA"
/codon_start=1
/product="zinc finger, X-linked, duplicated A"
/protein_id="AAH59356.1"
/db_xref="GeneID:7789"
/db_xref="HGNC:HGNC:13198"
/db_xref="MIM:300235"
/translation="MEIPKLLPARGTLQGGGGGGIPAGGGRVHRGPDSPAGQVPTRRL
LLPRGPQDGGPGRRREEASTASRGPGPSLFAPRPHQPSGGGDDFFLVLLDPVGGDVET
AGSGQAAGPVLREEAKAGPGLQGDESGANPAGCSAQGPHCLSAVPTPAPISAPGPAAA
FAGTVTIHNQDLLLRFENGVLTLATPPPHAWEPGAAPAQQPRCLIAPQAGFPQAAHPG
DCPELRSDLLLAEPAEPAPAPAPQEEAEGLAAALGPRGLLGSGPGVVLYLCPEALCGQ
TFAKKHQLKMHLLTHSSSQGQRPFKCPLGGCGWTFTTSYKLKRHLQSHDKLRPFGCPA
EGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLGAHQRSHFEPERPYQCA
FSGCKKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPF
LCDFDGCGWNFTSMSKLLRHKRKHDDDRRFMCPVEGCGKSFTRAEHLKGHSITHLGTK
PFVCPVAGCCARFSARSSLYIHSKKHLQDVDTWKSRCPISSCNKLFTSKHSMKTHMVK
RHKVGQDLLAQLEAANSLTPSSELTSQRQNDLSDAEIVSLFSDVPDSTSAALLDTALV
NSGILTIDVASVSSTLAGHLPANNNNSVGQAVDPPSLMATSDPPQSLDTSLFFGTAAT
GFQQSSLNMDEVSSVSVGPLGSLDSLAMKNSSPEPQALTPSSKLTVDTDTLTPSSTLC
ENSVSELLTPAKAEWSVHPNSDFFGQEGETQFGFPNAAGNHGSQKERNLITVTGSSFL
V"
BASE COUNT 581 a 808 c 743 g 552 t
ORIGIN
1 gcgacgcaga gatggaaatc ccgaagctgc tcccggctcg cgggacacta cagggcggcg
61 gcggcggcgg tatccccgcg ggtggcggcc gagtccaccg aggccctgac tcgccggctg
121 gccaggtccc cacgcgccgc ctcctgctgc cccggggccc ccaagatggc gggcccgggc
181 ggcggcgcga ggaggccagc acggcatcac ggggccctgg cccaagcctg ttcgcgccga
241 ggccccatca acctagcggc ggcggcgacg acttcttcct ggtgctgctt gacccggtgg
301 gtggcgacgt ggagaccgcg ggctccggtc aggccgcagg gcctgtgttg agggaggagg
361 ccaaggcggg cccggggctc cagggggacg agagcggcgc gaaccccgcg ggctgctctg
421 cgcagggccc ccactgcctg tccgcggttc ccactccggc cccgatctcc gcccccggcc
481 ccgccgcggc cttcgcgggc acagtcacta tccacaacca ggacctgctg ttgcgctttg
541 agaacggcgt cctcaccctg gccacgcccc caccacacgc ctgggagcca ggggccgctc
601 ctgcccagca gcccaggtgt ctgatcgccc cccaagctgg gttcccgcaa gccgcgcacc
661 cgggtgactg cccagagctg cggtccgacc tcctgctagc cgagcccgca gaacccgcgc
721 ctgctccggc gccccaggag gaggcggagg gcctggccgc cgccctgggc ccccgcggac
781 tgctgggctc tggtccaggc gtggtgctgt acctgtgccc cgaggcgctg tgcgggcaaa
841 ccttcgccaa gaagcaccag ctgaagatgc acctgctgac gcacagcagc agccagggcc
901 agaggccctt caaatgcccc ctgggtggct gcggctggac cttcaccacc tcttacaagc
961 tcaagaggca cctgcagtcg cacgataaac tgcggccctt cggctgccct gcggagggct
1021 gtggcaagag cttcaccacc gtgtacaacc tcaaggcgca catgaagggc catgagcagg
1081 agaactcgtt caaatgtgag gtgtgcgagg agagcttccc cacgcaggcc aaactcggcg
1141 cccaccagcg cagccacttc gaacccgaga ggccttacca gtgcgcgttt tctggctgca
1201 agaagacatt tatcacagtg agtgctctgt tttcccataa ccgcgcccat ttcagggaac
1261 aggaactgtt ttcctgctct ttccctggct gcagcaagca atatgacaag gcttgtaggc
1321 tgaaaattca cctgcggagt cacaccggcg agagaccttt cctttgtgac tttgatggct
1381 gtggctggaa cttcaccagc atgtccaaac tcttaaggca caaaaggaag cacgacgatg
1441 accggaggtt catgtgccct gtggaaggct gtgggaaatc tttcacgagg gccgaacatc
1501 tgaaaggcca cagcattacc cacctgggca caaagccttt cgtgtgtcct gtggcaggct
1561 gctgtgccag gttctctgct cgcagtagcc tctacattca ctccaagaaa cacctgcagg
1621 atgtggacac ttggaaaagc cgttgcccga tctcctcttg taataaactc ttcacatcca
1681 agcacagcat gaagacgcac atggttaaaa ggcataaggt gggccaggat ctcttagctc
1741 agctagaagc agcaaattct cttacaccca gcagtgaact taccagccag agacagaatg
1801 atctcagtga tgcagagata gtgtctctct tctctgatgt acctgacagt acttctgctg
1861 cattgctgga cacagcattg gtgaactctg gaatcttgac tattgatgtg gcttctgtga
1921 gctcgactct ggcagggcac ctccctgcta ataataataa ttccgtaggg caggctgtgg
1981 accctccgtc cttgatggcc accagcgacc ctcctcaaag tctggatacc tctctctttt
2041 ttggaacggc ggccactggt tttcagcaga gctccttaaa tatggatgag gtctcaagtg
2101 taagtgtggg gccattggga tctctggact ctttggccat gaaaaactcc agtccagagc
2161 ctcaggcttt gacacccagc agtaagctaa cagtggacac agatactctg actccttcga
2221 gcaccctttg tgaaaacagt gtctcagaac tactgacacc agccaaagcg gagtggagcg
2281 tacatcctaa ctctgacttc tttggacagg agggagaaac ccagtttgga ttccccaatg
2341 cagcaggaaa ccatggttct cagaaagaaa gaaatcttat cactgtgact ggcagctcat
2401 ttttggtatg aagcaactct attcattcct tgccatgtgg ctaactttta ttacagtcaa
2461 ttttgaggat attctggact aaatatttaa gtgcagtcat ttctttttgg tttgcaaaaa
2521 gagcacagcc ctggactatg agtttggaga tctaaattct gatcttgagt ctggaactga
2581 caagttgtgt gaccctcagc aagtcactta acctatctga gccttaattt ccttatttat
2641 aaattgtggt ggtttgaaca cattgcacaa aaaaaaaaaa aaaa
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