LOCUS BC059174 3938 bp mRNA linear HUM 30-MAR-2004 DEFINITION Homo sapiens TNF receptor-associated factor 3 interacting protein 1, mRNA (cDNA clone MGC:54069 IMAGE:6191726), complete cds. ACCESSION BC059174 VERSION BC059174.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3938) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3938) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: m Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20070261. FEATURES Location/Qualifiers source 1..3938 /db_xref="H-InvDB:HIT000259955" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:54069 IMAGE:6191726" /tissue_type="Peripheral Nervous System, sympathetic trunk" /clone_lib="Lupski_sympathetic_trunk" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3938 /gene="TRAF3IP1" /gene_synonym="DKFZp434F124" /gene_synonym="MIP-T3" /gene_synonym="MIPT3" /db_xref="GeneID:26146" /db_xref="MIM:607380" CDS 120..1997 /gene="TRAF3IP1" /gene_synonym="DKFZp434F124" /gene_synonym="MIP-T3" /gene_synonym="MIPT3" /codon_start=1 /product="TRAF3IP1 protein" /protein_id="AAH59174.1" /db_xref="GeneID:26146" /db_xref="MIM:607380" /translation="MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIR MTGFMKGLYTDAEMKSDNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPE RTNELLQIIGKCCLNKLSSDDAVRRVLAGEKGEVKGRASLTSRSQELDNKNVREEESR VHKNTEDRGDAEIKERSTSRDRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERE RAKARARPDSERQKDRGNRERDRDSERKKETERKSEGGKEKERLRDRDRERDRDKGKD RDRRRVKNGEHSWDLDREKNREHDKPEKKSASSGEMSKKLSDGTFKDSKAETETEIST RASKSLTTKTSKRRSKNSVEGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRI PRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNEEDDQFVVEAAPQ LSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKK EKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEAL QQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSINLTSR R" BASE COUNT 1188 a 773 c 1022 g 955 t ORIGIN 1 cgcgtcctgg caggaccggg cggcggcggc ggcggggccg gcggcggcca gggacccggg 61 cttaggctcg gccaggccgg ctgaggggcg cgggcggcca gcgggcggcg gacgccgtca 121 tgaacgcggc ggtggtgagg cggacgcagg aggcgctggg gaaagtgatt cggaggccgc 181 cgctgacaga gaagctgctg agcaagcccc cgttccgcta cctgcacgac atcatcacgg 241 aggtgattag aatgactggt ttcatgaagg gcctctacac agacgccgag atgaagtctg 301 ataatgtgaa ggataaagat gcaaaaatta gcttcctaca aaaggccata gacgtggttg 361 taatggtgtc gggagagcca ctgttggcca aaccagcccg aatcgtggcg gggcatgagc 421 ctgaaagaac aaacgagctg ctccagataa ttggaaaatg ctgtctcaac aagctctcta 481 gtgacgatgc ggtgcggagg gttttagctg gagagaaggg agaagtgaaa ggccgggcct 541 cactgacctc aagatctcag gaattggata ataagaatgt gcgagaagaa gagtccagag 601 ttcacaaaaa tacagaggat agaggagacg ctgaaataaa agagagaagt acaagcagag 661 atcgaaaaca gaaggaagaa ttgaaagaag accgcaagcc aagagaaaag gacaaggaca 721 aggagaaggc caaggagaat ggcggaaaca gacacagaga aggggagaga gagagagcca 781 aagcccgggc caggccagac agcgagcgac agaaagacag aggcaacagg gagcgggaca 841 gagactccga gcgcaagaag gagacagaga gaaagagtga gggggggaaa gagaaggaga 901 gactgagaga cagggaccga gagcgcgacc gggacaaagg gaaggacagg gacagacgga 961 gagtgaaaaa cggggagcac tcctgggacc tggacaggga gaagaacaga gagcatgaca 1021 aacccgagaa aaagtcagca agctcagggg agatgtctaa aaagttatca gatggaactt 1081 ttaaagactc caaggctgaa acagagactg agatttccac tagagcttcc aagtcattga 1141 caacaaaaac atcaaaacgg cgatccaaaa attcagtgga aggtgactcc accagtgatg 1201 cagaaggaga tgctggacct gctggccaag ataagtctga ggtgccagag actccagaaa 1261 ttcctaatga gctttcatcc aacatcagaa gaattcctcg gcctgggagt gcaagaccag 1321 cccctccccg ggtcaaacgg caagacagca tggaggcgct acaaatggat aggtcaggga 1381 gtggtaaaac cgtttcaaat gtgattacag agtcacacaa ttctgacaat gaagaggatg 1441 atcaatttgt ggtggaagct gcccctcagc tctctgaaat gtcagaaatt gaaatggtaa 1501 cagcagtgga actagaagaa gaggagaagc atggtggact tgtgaaaaaa attttggaga 1561 cgaagaaaga ttatgagaaa ttgcagcagt cacccaaacc tggggagaag gagcgatctc 1621 tctttgagtc ggcatggaag aaggagaagg acatcgtttc caaggagata gagaagctcc 1681 gcacgtccat ccagaccctg tgcaagagcg cacttcccct ggggaagatc atggactaca 1741 tccaggaaga cgtggatgcc atgcagaatg agctgcagat gtggcacagc gagaacaggc 1801 agcacgccga ggccctgcag caggagcaga ggatcacaga ctgtgccgtg gagcccttaa 1861 aggctgagct cgcggagctg gagcagctga tcaaagacca gcaagacaag atctgtgctg 1921 tgaaggccaa catcctcaag aatgaagaaa aaatccagaa aatggtatat agtatcaatt 1981 tgacttcgag aaggtgaaca ctcaaaagtt tcagagatga aaagtcacct cagtttaaaa 2041 gcaaaaagga agatagaaaa tcattactct tttaagttcc agtttgctaa gaaaatgaac 2101 agtttacaat gttattatcc agctaatttt cagagcttta aaactgtaag catgttaagt 2161 gtattaaaaa aaccatgttt tcttacctcc ttccagatgg aatactggct agttataaat 2221 agcgcttcca aacacctctg tgaaaagttt ttttgaaagc ctgttctttg tgtttctgct 2281 gtaacctgtt tagttctgta ccagaactct ctagcaggta agtggtgtgg gcataccaag 2341 ggaacagtag tcctttattt tggtttagtg gaaagacttt cagaggtcag tgccgaatga 2401 aggatgactg tgtacttttt gataggcact tgataagtag aatgaggcct gaaaatgaat 2461 acattatatt tttagttaat ttccaatgga aagggctaac ctcagcctgt ctccatatca 2521 ggtacctatc aactggattg ttttcatttt tgttttttga cctctttgta attgcatgta 2581 cttctctatg taattttcct cttgatctct actatcgttt gcttgtgttt ctagtcctta 2641 aagttcataa atttaaaaag gagatttcag gatggccttt atggacgttg tctggacata 2701 catcctcact ttcttccgca gtttaccctg gttttcctca gacagaggct agcgcagccc 2761 cccggagtcc ttgttctcct taagagggtc tcgctctgca aagcattggc gccatggctt 2821 ttcctttgca tgggtgtgca caccgagaga caggcagctt aggaaaaaca acataaggaa 2881 gacttaaaag gatgcactga tttacgacgt tttttgatgt tagccatttt tttggaaatt 2941 gttttttaaa gcaaaagttt tttaaaaaca tggtttatag tttttcactt acatatacta 3001 ttgtaaatac ttagcagagt cttaagttac tgtataaaac atttcattgt gtttgaagac 3061 atacttatgg gtcttgaggt ctgggtccta atacttttaa atagtgtatt tattatgtaa 3121 actgaggagt gccatttaaa gtgtgaggat tgcctgaaaa ggttttgttt ctttcttttt 3181 tttttttttt ttttgagatg gagtcttact ctgtcgccca ggctggagtg cagtggcgca 3241 atctcggctc actgcaacca ccgcctcccg agttcaagtg attctcctgc ctcagcctcc 3301 tgagtaactg ggactacagg cgcacgccac catgcccagc taatttttgt attttcagta 3361 gagatggggt ttcaccgtgt tgaccaggat ggtctccacc tcctgacctc gtgatccgcc 3421 tgcctcggcc tcccaaagtg ctgggattac aggcatgagc cactgcaccc ggccaggttt 3481 tgtttcttta aggattagca caaatggcac cgttgggttt ttcttcatac aatttccaaa 3541 ataaattctg tactcaggtt gttatatgat tttctgagct gaataagttc aggagcagat 3601 tattaagatc tgccattctg aaacgctggt ctttttctcc ttcctatagt gcaccataaa 3661 attctgtttg atcagattat attacataca ttttggggga gtggagggac atgagttaag 3721 tagcccttca tgtatttata atctcttttc tactgaatca aatgacttag ccatgaccct 3781 gaatggacct tgttttactt caagttgaga tgtctgcctt ttatgaattt gtatatgtga 3841 atagagtttg ggggttgcca aaaattgcat acattgtatg taagtaaaat tttttatgaa 3901 gtaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //