LOCUS BC058930 1974 bp mRNA linear HUM 15-FEB-2005
DEFINITION Homo sapiens BAT2 domain containing 1, mRNA (cDNA clone
IMAGE:4998749), partial cds.
ACCESSION BC058930
VERSION BC058930.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1974)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1974
/db_xref="H-InvDB:HIT000259940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4998749"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1974
/gene="BAT2D1"
/gene_synonym="BAT2-iso"
/gene_synonym="KIAA1096"
/gene_synonym="XTP2"
/db_xref="GeneID:23215"
CDS 244..>1974
/gene="BAT2D1"
/gene_synonym="BAT2-iso"
/gene_synonym="KIAA1096"
/gene_synonym="XTP2"
/codon_start=1
/product="BAT2D1 protein"
/protein_id="AAH58930.1"
/db_xref="GeneID:23215"
/translation="MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGL
QSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKTPEVP
PAQPKPGVAAPPEVAPAPKSWASNKQGGQGDGIQVNSQFQQEFPSLQAAGDQEKKEKE
TNDDNYGPGPSLRPPNVACWRDGGKAAGSPSSSDQDEKLPGQDESTAGTSEQNDILKV
VEKRIACGPPQAKLNGQQAALASQYRAMMPPYMFQQYPRMTYPPLHGPMRFPPSLSET
NKGLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQL
NFSDDDEQGSNSPKENNSEDQGSKASENNENKKETDEVSNTKSSSQIPAQPSVAKVPY
GKGPSFNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQR
RRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEIRE
REREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKE
KELERQKKKKK"
BASE COUNT 686 a 437 c 486 g 365 t
ORIGIN
1 cgctcgctcg ctccccctcg gaaagctgcg aaagtgcttt ggcggtttgt ccatccgcag
61 cttcggcttt tccagtctgg tggcccttcc ggccacccct ttaaccccag ctttccctcc
121 cccttctttc gatcagagat cggcggagac cctcgaagtg cgcaaacttg acactcaccc
181 tgaccggact ggggttttaa ggggtgtggc aggaggtttt ggactcgatg agtttccacc
241 gaaatgtcgg agaagtcagg ccagagcaca aaagcaaagg atgggaaaaa gtatgcaaca
301 ctcagtttat ttaatactta caaggggaaa tcattagaaa cacagaaaac cacagttgca
361 gctcgacatg gattacagag tcttggaaaa gtcggtattt cacggcgtat gcctccacct
421 gctaacctcc caagtcttaa agcagaaaac aaaggcaatg atcctaatgt aaacattgta
481 cctaaagatg gcacagggtg ggcatcaaaa caagagcaac atgaagaaga aaaaacacca
541 gaagtgccac cagcacagcc aaaacctggg gttgcagctc ccccagaagt agcacctgct
601 cccaaatcat gggccagtaa caagcaaggt gggcaaggag atggaatcca agtgaatagt
661 cagtttcagc aagaatttcc cagcctgcag gcagctgggg atcaggaaaa aaaagaaaag
721 gaaacaaatg atgacaacta tggacctgga cccagtttac gtccaccaaa tgttgcttgt
781 tggagagatg gtggtaaggc tgctggctca ccttcgtcat ctgatcaaga tgaaaagctc
841 cctggccagg atgaaagcac agctggaaca tcagagcaaa atgatatcct caaagtggtg
901 gaaaagagga tagcttgtgg tcctccacag gctaaactga atggacagca ggctgctctc
961 gcttcccagt atagagctat gatgcctcct tatatgttcc aacagtatcc gaggatgaca
1021 tatcctcctc tacatggtcc catgagattc ccaccttctt tatctgaaac aaacaaaggc
1081 cttcgaggaa gaggcccacc tccttcatgg gcctctgagc ctgaacgccc atccattctt
1141 agtgcatcag aactgaagga gcttgataaa tttgataacc tagatgctga agctgatgaa
1201 ggttgggcag gtgctcagat ggaagtagat tatacagagc aactgaattt cagtgatgat
1261 gatgaacaag gaagtaacag tcctaaagag aataacagtg aggatcaagg ttcaaaagcc
1321 tctgaaaaca acgaaaacaa aaaagaaaca gatgaagttt ccaacactaa atcatcttcc
1381 caaatacctg cccaaccatc agtagcaaaa gttccctatg ggaaaggacc ttcatttaat
1441 caggaacgtg gaacatcttc acatctgcca ccacctccaa agttgcttgc acagcagcat
1501 ccacctccag atcgacaggc agtacctgga agaccaggcc cctttccctc caagcagcaa
1561 gtagctgatg aagatgaaat atggaagcaa agacgaagac aacaatcaga aatttctgca
1621 gcagtagaac gtgctcgtaa acggcgtgaa gaggaagagc gaagaatgga agaacaaagg
1681 aaggcagctt gtgcggagaa actgaaacga ttggatgaga agcttggcat cctggaaaaa
1741 caaccatctc cagaggaaat tagggaaagg gagcgagaaa aagaacggga gcgtgagaaa
1801 gaacttgaaa aagaacaaga acaggagcga gagaaggaga gggaaaaaga cagagagaga
1861 cagcaggaaa aggagaaaga gctggagaag gagcaggaaa aacaaagaga aatggagaaa
1921 gaaagaaagc aagaaaaaga aaaagaacta gaacggcaga aaaaaaaaaa aaaa
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