LOCUS BC058921 2714 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens glutamyl-prolyl-tRNA synthetase, mRNA (cDNA clone
IMAGE:6172759), partial cds.
ACCESSION BC058921
VERSION BC058921.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2714)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2714)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62241041.
FEATURES Location/Qualifiers
source 1..2714
/db_xref="H-InvDB:HIT000259931"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6172759"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2714
/gene="EPRS"
/gene_synonym="EARS"
/gene_synonym="PARS"
/gene_synonym="PIG32"
/db_xref="GeneID:2058"
/db_xref="HGNC:HGNC:3418"
/db_xref="MIM:138295"
CDS 108..>2714
/gene="EPRS"
/gene_synonym="EARS"
/gene_synonym="PARS"
/gene_synonym="PIG32"
/codon_start=1
/product="EPRS protein"
/protein_id="AAH58921.1"
/db_xref="GeneID:2058"
/db_xref="HGNC:HGNC:3418"
/db_xref="MIM:138295"
/translation="MATLSLTVNSGDPPLGALLAVEHVKDDVSISVEEGKENILHVSE
NVIFTDVNSILRYLARVATTAGLYGSNLMEHTEIDHWLEFSATKLSSCDSFTSTINEL
NHCLSLRTYLVGNSLSLADLCVWATLKGNAAWQEQLKQKKAPVHVKRWFGFLEAQQAF
QSVGTKWDVSTTKARVAPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAA
LLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETI
MKYAEKLIQEGKAYVDDTPAEQMKAEREQRIESKHRKNPIEKNLQMWEEMKKGSQFGQ
SCCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTH
ALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGW
DDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYV
ALLKKEVIPVNVPEAQEEMKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMV
TFINWGNLNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLAETTHALPIPVICV
TYEHLITKPVLGKDEDFKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQ
PYEPVSPYSCKEAPCVLIYIPDGHTKEMPTSGSKEKTKVEATKNETSAPFKERPTPSL
NNNCTTSEDSLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKEKTGQE
YKPGNPPAEIGQNISSNSSASILESKSLYDEVAAQGEVVRKLKAEKSPKAKINEAVEC
LLSLKAQYKKKKK"
BASE COUNT 896 a 503 c 630 g 685 t
ORIGIN
1 gcggcgtcgg gtacgcgcac acgttgcatc ttcttccttt cgcggggtcc tccgtagttc
61 tggcacgagc caggcgtact gacaggtgga ccagcggact ggtggagatg gcgacgctct
121 ctctgaccgt gaattcagga gaccctccgc taggagcttt gctggcagta gaacacgtga
181 aagacgatgt cagcatttcc gttgaagaag ggaaagagaa tattcttcat gtttctgaaa
241 atgtgatatt cacagatgtg aattctatac ttcgctactt ggctagagtt gcaactacag
301 ctgggttata tggctctaat ctgatggaac atactgagat tgatcactgg ttggagttca
361 gtgctacaaa attatcttca tgtgattcct ttacttctac aattaatgaa ctcaatcatt
421 gcctgtctct gagaacatac ttagttggaa actccttgag tttagcagat ttatgtgttt
481 gggccaccct aaaaggaaat gctgcctggc aagaacagtt gaaacagaag aaagctccag
541 ttcatgtaaa acgttggttt ggctttcttg aagcccagca ggccttccag tcagtaggta
601 ccaagtggga tgtttcaaca accaaagctc gagtggcacc tgagaaaaag caagatgttg
661 ggaaatttgt tgagcttcca ggtgcggaga tgggaaaggt taccgtcaga tttcctccag
721 aggccagtgg ttacttacac attgggcatg caaaagctgc tcttctgaac cagcactacc
781 aggttaactt taaagggaaa ctgatcatga gatttgatga cacaaatcct gaaaaagaaa
841 aggaagattt tgagaaggtt atcttggaag atgttgcaat gttgcatatc aaaccagatc
901 aatttactta tacttcggat cattttgaaa ctataatgaa gtatgcagag aagctaattc
961 aagaagggaa ggcttatgtg gatgatactc ctgctgaaca gatgaaagca gaacgtgagc
1021 agaggataga atctaaacat agaaaaaacc ctattgagaa gaatctacaa atgtgggaag
1081 aaatgaaaaa agggagccag tttggtcagt cctgttgttt gcgagcaaaa attgacatga
1141 gtagtaacaa tggatgcatg agagatccaa ccctttatcg ctgcaaaatt caaccacatc
1201 caagaactgg aaataaatac aatgtttatc caacatatga ttttgcctgc cccatagttg
1261 acagcatcga aggtgttaca catgccctga gaacaacaga ataccatgac agagatgagc
1321 agttttactg gattattgaa gctttaggca taagaaaacc atatatttgg gaatatagtc
1381 ggctaaatct caacaacaca gtgctatcca aaagaaaact cacatggttt gtcaatgaag
1441 gactagtaga tggatgggat gacccaagat ttcctacggt tcgtggtgta ctgagaagag
1501 ggatgacagt tgaaggactg aaacagttta ttgctgctca gggctcctca cgttcagtcg
1561 tgaacatgga gtgggacaaa atctgggcgt ttaacaaaaa ggttattgac ccagtggctc
1621 cacgatatgt tgcattactg aagaaagaag tgatcccagt gaatgtacct gaagctcagg
1681 aggagatgaa agaagtagcc aaacacccaa agaatcctga ggttggcttg aagcctgtgt
1741 ggtatagtcc caaagttttc attgaaggtg ctgatgcaga gactttttcg gagggtgaga
1801 tggttacatt tataaattgg ggcaacctca acattacaaa aatacacaaa aatgcagatg
1861 gaaaaatcat atctcttgat gcaaagttga atttggaaaa caaagactac aagaaaacca
1921 ctaaggtcac ttggcttgca gagactacac atgctcttcc tattccagta atctgtgtca
1981 cttatgagca cttgatcaca aagccagtgc taggaaaaga cgaggacttt aagcagtatg
2041 tcaacaagaa cagtaagcat gaagagctaa tgctagggga tccctgcctt aaggatttga
2101 aaaaaggaga tattatacaa ctccagagaa gaggattctt catatgtgat caaccttatg
2161 aacctgttag cccatatagt tgcaaggaag ccccgtgtgt tttgatatac attcctgatg
2221 ggcacacaaa ggaaatgcca acatcagggt caaaggaaaa gaccaaagta gaagccacaa
2281 aaaatgagac ctctgctcct tttaaggaaa gaccaacacc ttctctgaat aataattgta
2341 ctacatctga ggattccttg gtcctttaca atagagtggc tgttcaagga gatgtggttc
2401 gtgaattaaa agccaagaaa gcaccaaagg aagatgtaga tgcagctgta aaacagcttt
2461 tgtctttgaa agctgaatat aaggagaaaa ctggccagga atataaacct ggaaaccctc
2521 ctgctgaaat aggacagaat atttcttcta attcctcagc aagtattctg gaaagtaaat
2581 ctctgtatga tgaagttgct gcacaagggg aggtggttcg taagctaaaa gctgaaaaat
2641 cccctaaggc taaaataaat gaagctgtag aatgcttact gtccctgaag gctcagtata
2701 aaaaaaaaaa aaaa
//