LOCUS BC058903 1771 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens intercellular adhesion molecule 3, mRNA (cDNA clone
MGC:64964 IMAGE:5207143), complete cds.
ACCESSION BC058903
VERSION BC058903.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1771)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1771)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12545399.
FEATURES Location/Qualifiers
source 1..1771
/db_xref="H-InvDB:HIT000259913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64964 IMAGE:5207143"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1771
/gene="ICAM3"
/gene_synonym="CD50"
/gene_synonym="CDW50"
/gene_synonym="ICAM-R"
/db_xref="GeneID:3385"
/db_xref="HGNC:HGNC:5346"
/db_xref="MIM:146631"
CDS 7..1650
/gene="ICAM3"
/gene_synonym="CD50"
/gene_synonym="CDW50"
/gene_synonym="ICAM-R"
/codon_start=1
/product="intercellular adhesion molecule 3"
/protein_id="AAH58903.1"
/db_xref="GeneID:3385"
/db_xref="HGNC:HGNC:5346"
/db_xref="MIM:146631"
/translation="MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLS
AGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAAFNLSNVTGNSRILCSVYCNG
SQITGSSNITVYRLPERVELAPLPPWQPVGQNFTLRCQVEDGSPRTSLTVVLLRWEEE
LSRQPAVEEPAEVTATVLASRDDHGAPFSCRTELDMQPQGLGLFVNTSAPRQLRTFVL
PVTPPRLVAPRFLEVETSWPVDCTLDGLFPASEAQVYLALGDQMLNATVMNHGDTLTA
TATATARADQEGAREIVCNVTLGGERREARENLTVFSFLGPIVNLSEPTAHEGSTVTV
SCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSFFCSATLEVDGEFLHRNSSV
QLRVLYGPKIDRATCPQHLKWKDKTRHVLQCQARGNPYPELRCLKEGSSREVPVGIPF
FVNVTHNGTYQCQASSSRGKYTLVVVMDIEAGSSHFVPVFVAVLLTLGVVTIVLALMY
VFREHQRSGSYHVREESTYLPLTSMQPTEAMGEEPSRAE"
BASE COUNT 381 a 523 c 540 g 327 t
ORIGIN
1 gtcagaatgg ccaccatggt accatccgtg ttgtggccca gggcctgctg gactctgctg
61 gtctgctgtc tgctgacccc aggtgtccag gggcaggagt tccttttgcg ggtggagccc
121 cagaaccctg tgctctctgc tggagggtcc ctgtttgtga actgcagtac tgattgtccc
181 agctctgaga aaatcgcctt ggagacgtcc ctatcaaagg agctggtggc cagtggcatg
241 ggctgggcag ccttcaatct cagcaacgtg actggcaaca gtcggatcct ctgctcagtg
301 tactgcaatg gctcccagat aacaggctcc tctaacatca ccgtgtacag gctcccggag
361 cgtgtggagc tggcacccct gcctccttgg cagccggtgg gccagaactt caccctgcgc
421 tgccaagtgg aggatgggtc gccccggacc agcctcacgg tggtgctgct tcgctgggag
481 gaggagctga gccggcagcc cgcagtggag gagccagcgg aggtcactgc cactgtgctg
541 gccagcagag acgaccacgg agcccctttc tcatgccgca cagaactgga catgcagccc
601 caggggctgg gactgttcgt gaacacctca gccccccgcc agctccgaac ctttgtcctg
661 cccgtgaccc ccccgcgcct cgtggccccc cggttcttgg aggtggaaac gtcgtggccg
721 gtggactgca ccctagacgg gctttttcca gcctcagagg cccaggtcta cctggcgctg
781 ggggaccaga tgctgaatgc gacagtcatg aaccacgggg acacgctaac ggccacagcc
841 acagccacgg cgcgcgcgga tcaggagggt gcccgggaga tcgtctgcaa cgtgacccta
901 gggggcgaga gacgggaggc ccgggagaac ttgacggtct ttagcttcct aggacccatt
961 gtgaacctca gcgagcccac cgcccatgag gggtccacag tgaccgtgag ttgcatggct
1021 ggggctcgag tccaggtcac gctggacgga gttccggccg cggccccggg gcagccagct
1081 caacttcagc taaatgctac cgagagtgac gacggacgca gcttcttctg cagtgccact
1141 ctcgaggtgg acggcgagtt cttgcacagg aacagtagcg tccagctgcg agtcctgtat
1201 ggtcccaaaa ttgaccgagc cacatgcccc cagcacttga aatggaaaga taaaacgaga
1261 cacgtcctgc agtgccaagc caggggcaac ccgtaccccg agctgcggtg tttgaaggaa
1321 ggctccagcc gggaggtgcc ggtggggatc ccgttcttcg tcaacgtaac acataatggt
1381 acttatcagt gccaagcgtc cagctcacga ggcaaataca ccctggtcgt ggtgatggac
1441 attgaggctg ggagctccca ctttgtcccc gtcttcgtgg cggtgttact gaccctgggc
1501 gtggtgacta tcgtactggc cttaatgtac gtcttcaggg agcaccaacg gagcggcagt
1561 taccatgtta gggaggagag cacctatctg cccctcacgt ctatgcagcc gacagaagca
1621 atgggggaag aaccgtccag agctgagtga cgctgggatc cgggatcaaa gttggcgggg
1681 gcttggctgt gccctcagat tccgcaccaa taaagccttc aaactcccta aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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