LOCUS BC058030 1614 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens fer (fps/fes related) tyrosine kinase, mRNA (cDNA
clone IMAGE:4738532), complete cds.
ACCESSION BC058030
VERSION BC058030.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1614)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885230
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1614
/db_xref="H-InvDB:HIT000259819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4738532"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1614
/gene="FER"
/gene_synonym="TYK3"
/db_xref="GeneID:2241"
/db_xref="HGNC:HGNC:3655"
/db_xref="MIM:176942"
CDS 326..817
/gene="FER"
/gene_synonym="TYK3"
/codon_start=1
/product="FER protein"
/protein_id="AAH58030.1"
/db_xref="GeneID:2241"
/db_xref="HGNC:HGNC:3655"
/db_xref="MIM:176942"
/translation="MGFGSDLKNSHEAVLKLQDWELRLLETVKKFMALRIKSDKEYAS
TLQNLCNQVDKGSTVQMNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTM
MIKDKQQVKKSYIGVHQQIEAEMIKVTKTELEKLKCSYRQLIKEMNSAKGKYKEALAK
VKK"
BASE COUNT 625 a 279 c 332 g 378 t
ORIGIN
1 ggggggttcg ggcttgtcag gttctagctc atgttttttg gctagaccta tgaccatttt
61 cgctagactt cactgcacgt tttctcaagt atcttctttg tccctaatgt gtgacacctc
121 atcatggaca cgctacttta gctaaggcat gaccagcaat gaacagtagt aagagatggg
181 gtcgcgcttt gttgcctagg ctgatcttga actcctgggc tcaagcaata tgcctgcttt
241 ggcctctcag agtgctggga ttacagatat gtgctgatta gaaggctcac ttgtgcagtg
301 tggaggataa ccagtgcctt acaaaatggg gtttgggagt gacctgaaga attcacatga
361 agcagtgtta aaattgcaag actgggaatt acggttactg gaaacagtaa agaaatttat
421 ggccctgaga ataaaaagtg ataaagaata tgcatctact ttacagaacc tttgtaatca
481 agttgataag ggaagtactg tccaaatgaa ttatgtcagc aacgtatcca agtcttggct
541 acttatgatt cagcagacag aacaacttag taggataatg aagacacatg cagaggactt
601 gaactctgga cctttacaca ggctcaccat gatgattaag gacaagcagc aggtgaagaa
661 aagttacata ggtgttcatc agcagataga ggcagagatg atcaaggtta ccaaaacaga
721 attggagaag ttaaaatgca gctatagaca attaataaaa gaaatgaatt ctgccaaagg
781 gaaatataaa gaagctttag ctaaagtgaa gaagtgatgg atggttgtgg gaataaatta
841 tgttgttgga ttttttccac aaaaattata taaaaataaa gaatgtcacc ataagaaatg
901 aaagaaaact agacattggc ataggcaagt atttcatgac caaaaactca aaagcaaata
961 caataaaaac aaagataaat agctgggacc taattaaact aaagagcttt tgcacagcaa
1021 aaggaacagt cagcagagta aacagagtgg gaggaaatct tcacaatcta tacacctaac
1081 aaaggactaa aatccagaat ctacaacgaa tcagtaagaa aaaaaactaa caatctcatc
1141 aaaaagtggg ctaagcacat gaatagacat gaatagacaa ttctcaaaag aagatataca
1201 aataggtaac aaacctatga aaaaatgctc aacatcacta attttcaggg aaatgcaaat
1261 caaaaccaca atgtgatacc tccttactcc tgcaagaatg gccataatac aaaaacaaaa
1321 caaaacaaaa cagtagatgt tggcgtggat atggaaatca gggaacactt ctacacggct
1381 ggtgggaatg taaaatagta cagccactat ggaaaacaga gtggagattc ctttaagagc
1441 taaaagtaga actaccattt gatccagcaa tcccactact gggtatccac ccagaggaaa
1501 agaagtcata tgaaaaagat acatgcacat gcatgtttat agcagcacaa ttcacaattg
1561 caaaatcgtg gaaccaaccc aaaaaaaaaa aaaaaaaaaa aaaaaaaagc atgt
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