LOCUS BC057840 1058 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5,
mRNA (cDNA clone MGC:71831 IMAGE:4795732), complete cds.
ACCESSION BC057840
VERSION BC057840.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1058)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538468.
FEATURES Location/Qualifiers
source 1..1058
/db_xref="H-InvDB:HIT000259776"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71831 IMAGE:4795732"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1058
/gene="PSMB5"
/gene_synonym="LMPX"
/gene_synonym="MB1"
/gene_synonym="X"
/db_xref="GeneID:5693"
/db_xref="HGNC:HGNC:9542"
/db_xref="MIM:600306"
CDS 20..811
/gene="PSMB5"
/gene_synonym="LMPX"
/gene_synonym="MB1"
/gene_synonym="X"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 5"
/protein_id="AAH57840.1"
/db_xref="GeneID:5693"
/db_xref="HGNC:HGNC:9542"
/db_xref="MIM:600306"
/translation="MALASVLERPLPVNQRGFFGLGGRADLLDLGPGSLSDGLSLAAP
GWGVPEEPGIEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLG
TMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMI
CGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRA
IYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP"
BASE COUNT 242 a 257 c 297 g 262 t
ORIGIN
1 ctttctgccc acactagaca tggcgcttgc cagcgtgttg gagagaccgc taccggtgaa
61 ccagcgcggg tttttcggac ttgggggtcg tgcagatctg ctggatctag gtccagggag
121 tctcagtgat ggtctgagcc tggccgcgcc aggctggggt gtcccagaag agccaggaat
181 cgaaatgctt catggaacaa ccaccctggc cttcaagttc cgccatggag tcatagttgc
241 agctgactcc agggctacag cgggtgctta cattgcctcc cagacggtga agaaggtgat
301 agagatcaac ccatacctgc ttggcaccat ggctgggggc gcagcggatt gcagcttctg
361 ggaacggctg ttggctcggc aatgtcgaat ctatgagctt cgaaataagg aacgcatctc
421 tgtagcagct gcctccaaac tgcttgccaa catggtgtat cagtacaaag gcatggggct
481 gtccatgggc accatgatct gtggctggga taagagaggc cctggcctct actacgtgga
541 cagtgaaggg aaccggattt caggggccac cttctctgta ggttctggct ctgtgtatgc
601 atatggggtc atggatcggg gctattccta tgacctggaa gtggagcagg cctatgatct
661 ggcccgtcga gccatctacc aagccaccta cagagatgcc tactcaggag gtgcagtcaa
721 cctctaccac gtgcgggagg atggctggat ccgagtctcc agtgacaatg tggctgatct
781 acatgagaag tatagtggct ctaccccctg aaagagggtg gatgcagctg cttgtgtttc
841 ttggggtgac tgtcattggt aatacggaca cagtgaccca tcctccatcc tatttatagt
901 ggaagggcct tcaattgtat cagtactttt ttttaagctc tggcacattg acctctatgt
961 gttaccagtc attaatgagc tgctgcagag gtgactattt gttttacttt cttggatgtt
1021 aacattacac tactcactac ccaaaaaaaa aaaaaaaa
//